MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:26526352-28146768

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm24064	1	26566833 to 26566938	105	+	snoRNA gene	predicted gene, 24064
Tssr6125	1	26616984 to 26616993	9	+	TSS region	transcription start site region 6125
Tssr25	1	26617003 to 26617008	5	+	TSS region	transcription start site region 25
Tssr6126	1	26617024 to 26617031	7	+	TSS region	transcription start site region 6126
Gm31136	1	26619658 to 26775020	155362	+	lncRNA gene	predicted gene, 31136
D1Nds4	1	26634361 to 26634520	159		DNA segment	DNA segment, Chr 1, Nuffield Department of Surgery 4
Cplaq4	1	26634361 to 26634520	159		QTL	circadian period of locomotor activity 4
4931408C20Rik	1	26681814 to 26687460	5646	-	protein coding gene	RIKEN cDNA 4931408C20 gene
Tssr11160	1	26687458 to 26687462	4	-	TSS region	transcription start site region 11160
n-R5s209	1	26959103 to 26959221	118	-	rRNA gene	nuclear encoded rRNA 5S 209
D1Mit410	1	27024995 to 27025110	115		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 410
Gm19641	1	27336352 to 27336768	416	-	pseudogene	predicted gene, 19641
Tssr26	1	27716301 to 27716304	3	+	TSS region	transcription start site region 26
Gm18179	1	27787873 to 27788664	791	-	pseudogene	predicted gene, 18179
Tssr6127	1	27884017 to 27884028	11	+	TSS region	transcription start site region 6127
Tssr6128	1	27884030 to 27884051	21	+	TSS region	transcription start site region 6128
Gm5524	1	27884046 to 27902396	18350	+	lincRNA gene	predicted gene 5524
Gm18776	1	27900419 to 27901072	653	-	pseudogene	predicted gene, 18776
Gm19028	1	27989910 to 27991781	1871	+	pseudogene	predicted gene, 19028