Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:24211890-24637472

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col9a1	1	24177610 to 24252684	75074	+	protein coding gene	collagen, type IX, alpha 1
Tssr6107	1	24230807 to 24230830	23	+	TSS region	transcription start site region 6107
Col19a1	1	24261890 to 24587472	325582	-	protein coding gene	collagen, type XIX, alpha 1
D1Mit432	1	24332803 to 24332898	95		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 432
Tssr6108	1	24338532 to 24338539	7	+	TSS region	transcription start site region 6108
D1Mit520	1	24413293 to 24413428	135		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-520
Cpgi88	1	24453419 to 24453801	382		CpG island	CpG island 88
Gm26418	1	24548841 to 24548977	136	-	snoRNA gene	predicted gene, 26418
Cpgi89	1	24586289 to 24587566	1277		CpG island	CpG island 89
Gm2795	1	24586502 to 24587738	1236		unclassified gene	predicted gene 2795
Tssr11135	1	24587413 to 24587425	12	-	TSS region	transcription start site region 11135
Tssr11136	1	24587433 to 24587448	15	-	TSS region	transcription start site region 11136
Tubb4b-ps2	1	24594087 to 24595423	1336	-	pseudogene	tubulin, beta 4B class IVB, pseudogene 2
Cpgi90	1	24595197 to 24595534	337		CpG island	CpG island 90
Tssr11137	1	24595487 to 24595488	1	-	TSS region	transcription start site region 11137
Gm28439	1	24611535 to 24612410	875	-	pseudogene	predicted gene 28439
Cpgi91	1	24611541 to 24611993	452		CpG island	CpG island 91
Tssr6109	1	24612002 to 24612039	37	+	TSS region	transcription start site region 6109
Cpgi92	1	24612251 to 24615351	3100		CpG island	CpG island 92
Gm10222	1	24612407 to 24612700	293	-	pseudogene	predicted gene 10222
Tssr22	1	24612683 to 24612694	11	+	TSS region	transcription start site region 22
Gm28438	1	24612775 to 24613119	344	-	pseudogene	predicted gene 28438
Tssr11138	1	24613116 to 24613119	3	-	TSS region	transcription start site region 11138
Tssr23	1	24613175 to 24613194	19	+	TSS region	transcription start site region 23
Gm28437	1	24613189 to 24613971	782	-	pseudogene	predicted gene 28437
Gm10925	1	24613974 to 24614651	677	-	pseudogene	predicted gene 10925
Gm28661	1	24614885 to 24615565	680	-	pseudogene	predicted gene 28661
Gm29216	1	24615706 to 24616197	491	-	pseudogene	predicted gene 29216
Cpgi93	1	24615768 to 24616144	376		CpG island	CpG island 93
Tssr6110	1	24615894 to 24615913	19	+	TSS region	transcription start site region 6110