Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:23446846-24076866

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm7784 1 23479539 to 23480527 988 + pseudogene predicted gene 7784
Gm28822 1 23574587 to 23596664 22077 + lincRNA gene predicted gene 28822
Cpgi83 1 23761653 to 23763569 1916 CpG island CpG island 83
Tssr6095 1 23761749 to 23761759 10 + TSS region transcription start site region 6095
Tssr6096 1 23761787 to 23761807 20 + TSS region transcription start site region 6096
Tssr6097 1 23761808 to 23761830 22 + TSS region transcription start site region 6097
Tssr6098 1 23761846 to 23761866 20 + TSS region transcription start site region 6098
B3gat2 1 23761926 to 23847865 85939 + protein coding gene beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
Tssr6099 1 23761976 to 23761999 23 + TSS region transcription start site region 6099
Tssr6100 1 23762003 to 23762018 15 + TSS region transcription start site region 6100
Tssr6101 1 23773259 to 23773263 4 + TSS region transcription start site region 6101
Smap1 1 23844846 to 23922317 77471 - protein coding gene small ArfGAP 1
Tssr11123 1 23877770 to 23877783 13 - TSS region transcription start site region 11123
Tssr11124 1 23891909 to 23891926 17 - TSS region transcription start site region 11124
Tssr11125 1 23909687 to 23909706 19 - TSS region transcription start site region 11125
Tssr11126 1 23909734 to 23909740 6 - TSS region transcription start site region 11126
Cpgi84 1 23921577 to 23922580 1003 CpG island CpG island 84
Tssr11127 1 23922252 to 23922281 29 - TSS region transcription start site region 11127
Tssr11128 1 23922283 to 23922366 83 - TSS region transcription start site region 11128
Tssr11129 1 23922370 to 23922391 21 - TSS region transcription start site region 11129
Tssr11130 1 23922394 to 23922438 44 - TSS region transcription start site region 11130
Sdhaf4 1 23995939 to 24005640 9701 - protein coding gene succinate dehydrogenase complex assembly factor 4
Cpgi85 1 24005264 to 24005869 605 CpG island CpG island 85
Gm26524 1 24005505 to 24005894 389 + lncRNA gene predicted gene, 26524
Tssr11131 1 24005608 to 24005646 38 - TSS region transcription start site region 11131
Fam135a 1 24011093 to 24100341 89248 - protein coding gene family with sequence similarity 135, member A
D1Mit169.2 1 24064924 to 24065033 109 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 169.2
D1Mit169 1 24064967 to 24065107 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 169
Lscc1 1 24064967 to 24065107 140 QTL lung squamous cell carcinoma 1
Gm30756 1 24071917 to 24073152 1235 + pseudogene predicted gene, 30756