Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:23309587-23861664

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20954 1 23345956 to 23346599 643 - pseudogene predicted gene, 20954
Ogfrl1 1 23366424 to 23383210 16786 - protein coding gene opioid growth factor receptor-like 1
Cpgi82 1 23382396 to 23383589 1193 CpG island CpG island 82
Tssr11120 1 23383129 to 23383146 17 - TSS region transcription start site region 11120
Tssr11121 1 23383149 to 23383225 76 - TSS region transcription start site region 11121
Gm19673 1 23391678 to 23399959 8281 - lncRNA gene predicted gene, 19673
Tssr11122 1 23397559 to 23397562 3 - TSS region transcription start site region 11122
Gm7784 1 23479539 to 23480527 988 + pseudogene predicted gene 7784
Gm28822 1 23574587 to 23596664 22077 + lincRNA gene predicted gene 28822
Cpgi83 1 23761653 to 23763569 1916 CpG island CpG island 83
Tssr6095 1 23761749 to 23761759 10 + TSS region transcription start site region 6095
Tssr6096 1 23761787 to 23761807 20 + TSS region transcription start site region 6096
Tssr6097 1 23761808 to 23761830 22 + TSS region transcription start site region 6097
Tssr6098 1 23761846 to 23761866 20 + TSS region transcription start site region 6098
B3gat2 1 23761926 to 23847865 85939 + protein coding gene beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
Tssr6099 1 23761976 to 23761999 23 + TSS region transcription start site region 6099
Tssr6100 1 23762003 to 23762018 15 + TSS region transcription start site region 6100
Tssr6101 1 23773259 to 23773263 4 + TSS region transcription start site region 6101
Smap1 1 23844846 to 23922317 77471 - protein coding gene small ArfGAP 1