Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:21249677-21452199

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gsta3	1	21240585 to 21265575	24990	+	protein coding gene	glutathione S-transferase, alpha 3
Tssr6071	1	21249741 to 21249751	10	+	TSS region	transcription start site region 6071
Tssr6072	1	21249804 to 21249819	15	+	TSS region	transcription start site region 6072
Gm28836	1	21250359 to 21271593	21234	-	antisense lncRNA gene	predicted gene 28836
Tssr11089	1	21256186 to 21256216	30	-	TSS region	transcription start site region 11089
Tssr11090	1	21256501 to 21256512	11	-	TSS region	transcription start site region 11090
Tssr6073	1	21256746 to 21256758	12	+	TSS region	transcription start site region 6073
Tssr6074	1	21257141 to 21257154	13	+	TSS region	transcription start site region 6074
Tssr6075	1	21262816 to 21262834	18	+	TSS region	transcription start site region 6075
Tssr6076	1	21262835 to 21262868	33	+	TSS region	transcription start site region 6076
Tssr6077	1	21262891 to 21262903	12	+	TSS region	transcription start site region 6077
Tssr6078	1	21264836 to 21264867	31	+	TSS region	transcription start site region 6078
D1Mit372b	1	21270020 to 21270142	122		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 372b
Tssr6079	1	21272366 to 21272401	35	+	TSS region	transcription start site region 6079
Gm7094	1	21272403 to 21272906	503	+	pseudogene	predicted pseudogene 7094
Gm4956	1	21285246 to 21298312	13066	-	pseudogene	predicted gene 4956
Tssr11091	1	21291526 to 21291543	17	-	TSS region	transcription start site region 11091
Tssr11092	1	21291553 to 21291562	9	-	TSS region	transcription start site region 11092
Tssr6080	1	21291663 to 21291674	11	+	TSS region	transcription start site region 6080
Tssr11093	1	21291679 to 21291682	3	-	TSS region	transcription start site region 11093
Tssr11094	1	21298220 to 21298260	40	-	TSS region	transcription start site region 11094
Tssr11095	1	21299986 to 21300005	19	-	TSS region	transcription start site region 11095
Gm21909	1	21312517 to 21316320	3803	-	pseudogene	predicted gene, 21909
Tssr11096	1	21325736 to 21325740	4	-	TSS region	transcription start site region 11096
Tssr6081	1	21349598 to 21349619	21	+	TSS region	transcription start site region 6081
Tssr6082	1	21349669 to 21349700	31	+	TSS region	transcription start site region 6082
Khdc1a	1	21349677 to 21352199	2522	+	protein coding gene	KH domain containing 1A
Gm16329	1	21354005 to 21355116	1111	+	pseudogene	predicted gene 16329
Gm16327	1	21364803 to 21365030	227	+	pseudogene	predicted gene 16327
Tssr6083	1	21368235 to 21368256	21	+	TSS region	transcription start site region 6083
Khdc1c	1	21368331 to 21369743	1412	+	protein coding gene	KH domain containing 1C
Gm33147	1	21369788 to 21381308	11520	-	lncRNA gene	predicted gene, 33147
Gm2709	1	21372670 to 21373764	1094	+	pseudogene	predicted gene 2709
Gm16533	1	21379555 to 21379782	227	+	pseudogene	predited gene 16533
Khdc1b	1	21383556 to 21386373	2817	+	protein coding gene	KH domain containing 1B
Gm16328	1	21390906 to 21391101	195	+	pseudogene	predicted gene 16328
Kcnq5	1	21398403 to 21961942	563539	-	protein coding gene	potassium voltage-gated channel, subfamily Q, member 5
D1Mit317	1	21427649 to 21427770	121		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 317