Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:20881437-21121452

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
6720483E21Rik 1 20888650 to 20890473 1823 - lincRNA gene RIKEN cDNA 6720483E21 gene
Cpgi70 1 20890402 to 20891391 989 CpG island CpG island 70
Tssr6055 1 20890547 to 20890560 13 + TSS region transcription start site region 6055
Tssr6056 1 20890562 to 20890587 25 + TSS region transcription start site region 6056
Tssr6057 1 20890595 to 20890617 22 + TSS region transcription start site region 6057
Paqr8 1 20890622 to 20939650 49028 + protein coding gene progestin and adipoQ receptor family member VIII
Gm24171 1 20915410 to 20915540 130 - snoRNA gene predicted gene, 24171
Tssr6058 1 20917840 to 20917854 14 + TSS region transcription start site region 6058
Tssr6059 1 20917856 to 20917859 3 + TSS region transcription start site region 6059
Cpgi71 1 20934588 to 20935590 1002 CpG island CpG island 71
Gm28064 1 20945711 to 20946914 1203 + pseudogene predicted gene 28064
Cpgi72 1 20951528 to 20952055 527 CpG island CpG island 72
Tssr6060 1 20951592 to 20951603 11 + TSS region transcription start site region 6060
Tssr6061 1 20951606 to 20951635 29 + TSS region transcription start site region 6061
Efhc1 1 20951626 to 20990841 39215 + protein coding gene EF-hand domain (C-terminal) containing 1
Tssr6062 1 20951666 to 20951717 51 + TSS region transcription start site region 6062
Tssr6063 1 20951725 to 20951734 9 + TSS region transcription start site region 6063
Tssr11086 1 20997607 to 20997611 4 - TSS region transcription start site region 11086
Tram2 1 21001397 to 21079225 77828 - protein coding gene translocating chain-associating membrane protein 2
Tssr11087 1 21001437 to 21001452 15 - TSS region transcription start site region 11087
D1Mit4 1 21069244 to 21069436 192 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 4
Cpgi73 1 21078734 to 21079876 1142 CpG island CpG island 73
Tssr11088 1 21079162 to 21079243 81 - TSS region transcription start site region 11088
Gm28287 1 21080114 to 21081748 1634 + antisense lncRNA gene predicted gene 28287