Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:20790547-20990560

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mcm3	1	20803014 to 20820213	17199	-	protein coding gene	minichromosome maintenance complex component 3
Tssr11080	1	20804814 to 20804817	3	-	TSS region	transcription start site region 11080
Tssr11081	1	20816757 to 20816771	14	-	TSS region	transcription start site region 11081
Tssr11082	1	20817298 to 20817325	27	-	TSS region	transcription start site region 11082
Cpgi69	1	20819874 to 20820410	536		CpG island	CpG island 69
Tssr11083	1	20820213 to 20820286	73	-	TSS region	transcription start site region 11083
Gm20587	1	20821331 to 20822515	1184	+	pseudogene	predicted gene, 20587
Gm28065	1	20836661 to 20839689	3028	+	lincRNA gene	predicted gene 28065
Tssr6054	1	20836826 to 20836848	22	+	TSS region	transcription start site region 6054
Gm24723	1	20842535 to 20842666	131	-	snoRNA gene	predicted gene, 24723
Tssr11084	1	20869924 to 20869930	6	-	TSS region	transcription start site region 11084
Tssr11085	1	20869951 to 20869954	3	-	TSS region	transcription start site region 11085
Tssr19	1	20869971 to 20869977	6	-	TSS region	transcription start site region 19
D1Mit231	1	20871396 to 20871663	267		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 231
Obq2	1	20871396 to 20871663	267		QTL	obesity QTL 2
6720483E21Rik	1	20888650 to 20890473	1823	-	lincRNA gene	RIKEN cDNA 6720483E21 gene
Cpgi70	1	20890402 to 20891391	989		CpG island	CpG island 70
Tssr6055	1	20890547 to 20890560	13	+	TSS region	transcription start site region 6055
Tssr6056	1	20890562 to 20890587	25	+	TSS region	transcription start site region 6056
Tssr6057	1	20890595 to 20890617	22	+	TSS region	transcription start site region 6057
Paqr8	1	20890622 to 20939650	49028	+	protein coding gene	progestin and adipoQ receptor family member VIII
Gm24171	1	20915410 to 20915540	130	-	snoRNA gene	predicted gene, 24171
Tssr6058	1	20917840 to 20917854	14	+	TSS region	transcription start site region 6058
Tssr6059	1	20917856 to 20917859	3	+	TSS region	transcription start site region 6059
Cpgi71	1	20934588 to 20935590	1002		CpG island	CpG island 71
Gm28064	1	20945711 to 20946914	1203	+	pseudogene	predicted gene 28064
Cpgi72	1	20951528 to 20952055	527		CpG island	CpG island 72
Tssr6060	1	20951592 to 20951603	11	+	TSS region	transcription start site region 6060
Tssr6061	1	20951606 to 20951635	29	+	TSS region	transcription start site region 6061
Efhc1	1	20951626 to 20990841	39215	+	protein coding gene	EF-hand domain (C-terminal) containing 1
Tssr6062	1	20951666 to 20951717	51	+	TSS region	transcription start site region 6062
Tssr6063	1	20951725 to 20951734	9	+	TSS region	transcription start site region 6063