Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:20569882-20784298

21 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pkhd1	1	20057779 to 20618064	560285	-	protein coding gene	polycystic kidney and hepatic disease 1
Tssr11074	1	20586909 to 20586913	4	-	TSS region	transcription start site region 11074
D1Mit276	1	20589545 to 20589684	139		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 276
Tssr18	1	20606080 to 20606084	4	+	TSS region	transcription start site region 18
Tssr11075	1	20617973 to 20617990	17	-	TSS region	transcription start site region 11075
Tssr11076	1	20617992 to 20618089	97	-	TSS region	transcription start site region 11076
Tssr11077	1	20618092 to 20618097	5	-	TSS region	transcription start site region 11077
Tssr11078	1	20626820 to 20626842	22	-	TSS region	transcription start site region 11078
Tssr6050	1	20669879 to 20669884	5	+	TSS region	transcription start site region 6050
Gm28653	1	20669882 to 20684298	14416	+	lincRNA gene	predicted gene 28653
Lincmd1	1	20669882 to 20682958	13076	+	lincRNA gene	long intergenic non-protein coding RNA of muscle differentiation 1
Tssr6051	1	20670066 to 20670081	15	+	TSS region	transcription start site region 6051
Mir206	1	20679010 to 20679082	72	+	miRNA gene	microRNA 206
Mirc37	1	20679010 to 20682887	3877		complex/cluster/region	microRNA cluster 37, including Mir133b through Mir206
Mir133b	1	20682769 to 20682887	118	+	miRNA gene	microRNA 133b
Tssr6052	1	20682855 to 20682857	2	+	TSS region	transcription start site region 6052
1700113H21Rik	1	20714276 to 20714742	466		unclassified gene	RIKEN cDNA 1700113H21 gene
Tssr6053	1	20730903 to 20730908	5	+	TSS region	transcription start site region 6053
Il17a	1	20730905 to 20734496	3591	+	protein coding gene	interleukin 17A
Il17f	1	20777146 to 20785274	8128	-	protein coding gene	interleukin 17F
Tssr11079	1	20784266 to 20784271	5	-	TSS region	transcription start site region 11079