Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:194940510-195050520

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd34 1 194938819 to 194961279 22460 + protein coding gene CD34 antigen
Tssr10847 1 194943853 to 194943866 13 + TSS region transcription start site region 10847
Gm16897 1 194955759 to 194976959 21200 - antisense lncRNA gene predicted gene, 16897
Gm39749 1 194967967 to 194970875 2908 - lncRNA gene predicted gene, 39749
Cpgi1249 1 194976051 to 194977075 1024 CpG island CpG island 1249
Tssr10848 1 194976342 to 194976391 49 + TSS region transcription start site region 10848
Tssr10849 1 194976400 to 194976431 31 + TSS region transcription start site region 10849
Tssr10850 1 194977054 to 194977059 5 + TSS region transcription start site region 10850
Tssr10851 1 194981143 to 194981148 5 + TSS region transcription start site region 10851
Tssr10852 1 194986519 to 194986544 25 + TSS region transcription start site region 10852
Tssr10853 1 194986594 to 194986611 17 + TSS region transcription start site region 10853
Tssr10854 1 194986615 to 194986641 26 + TSS region transcription start site region 10854
Tssr10855 1 194986649 to 194986683 34 + TSS region transcription start site region 10855
Gm32250 1 194989062 to 194995345 6283 - lincRNA gene predicted gene, 32250
Tssr10856 1 194991248 to 194991257 9 + TSS region transcription start site region 10856
Gm37334 1 194993258 to 194996195 2937 + unclassified gene predicted gene, 37334
Tssr10857 1 194995510 to 194995520 10 + TSS region transcription start site region 10857
Tssr15867 1 194999444 to 194999472 28 - TSS region transcription start site region 15867
Tssr10858 1 195013620 to 195013628 8 + TSS region transcription start site region 10858
9630010A21Rik 1 195013746 to 195016448 2702 + unclassified gene RIKEN cDNA 9630010A21 gene
Tssr10859 1 195017150 to 195017181 31 + TSS region transcription start site region 10859
A330023F24Rik 1 195017399 to 195037908 20509 + lncRNA gene RIKEN cDNA A330023F24 gene
Tssr10860 1 195017416 to 195017431 15 + TSS region transcription start site region 10860
Gm37027 1 195017892 to 195018242 350 - lincRNA gene predicted gene, 37027
Tssr15868 1 195018240 to 195018252 12 - TSS region transcription start site region 15868
Tssr10861 1 195018595 to 195018600 5 + TSS region transcription start site region 10861
Tssr10862 1 195034186 to 195034227 41 + TSS region transcription start site region 10862
Cd46 1 195036826 to 195092249 55423 - protein coding gene CD46 antigen, complement regulatory protein
Mirc29 1 195037040 to 195037634 594 complex/cluster/region microRNA cluster 29, including Mir29b-2 through Mir29c
Mir29b-2 1 195037040 to 195037120 80 + miRNA gene microRNA 29b-2
Tssr10863 1 195037114 to 195037118 4 + TSS region transcription start site region 10863
Mir29c 1 195037547 to 195037634 87 + miRNA gene microRNA 29c
Gm37366 1 195042383 to 195044679 2296 + unclassified gene predicted gene, 37366