Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:194792232-194992240

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Plxna2	1	194619829 to 194816869	197040	+	protein coding gene	plexin A2
Gm19777	1	194819730 to 194820087	357	-	pseudogene	predicted gene, 19777
Mir3962	1	194822001 to 194822064	63	+	miRNA gene	microRNA 3962
Gm23885	1	194858657 to 194858950	293	+	unclassified non-coding RNA gene	predicted gene, 23885
Cpgi1247	1	194879514 to 194879672	158		CpG island	CpG island 1247
Gm39748	1	194886446 to 194901237	14791	-	lncRNA gene	predicted gene, 39748
Tssr382	1	194892232 to 194892240	8	+	TSS region	transcription start site region 382
Cpgi1248	1	194938779 to 194939207	428		CpG island	CpG island 1248
Cd34	1	194938819 to 194961279	22460	+	protein coding gene	CD34 antigen
Tssr10844	1	194938838 to 194938845	7	+	TSS region	transcription start site region 10844
Tssr10845	1	194938870 to 194938968	98	+	TSS region	transcription start site region 10845
Tssr10846	1	194938970 to 194938981	11	+	TSS region	transcription start site region 10846
Tssr10847	1	194943853 to 194943866	13	+	TSS region	transcription start site region 10847
Gm16897	1	194955759 to 194976959	21200	-	antisense lncRNA gene	predicted gene, 16897
Gm39749	1	194967967 to 194970875	2908	-	lncRNA gene	predicted gene, 39749
Cpgi1249	1	194976051 to 194977075	1024		CpG island	CpG island 1249
Tssr10848	1	194976342 to 194976391	49	+	TSS region	transcription start site region 10848
Tssr10849	1	194976400 to 194976431	31	+	TSS region	transcription start site region 10849
Tssr10850	1	194977054 to 194977059	5	+	TSS region	transcription start site region 10850
Tssr10851	1	194981143 to 194981148	5	+	TSS region	transcription start site region 10851
Tssr10852	1	194986519 to 194986544	25	+	TSS region	transcription start site region 10852
Tssr10853	1	194986594 to 194986611	17	+	TSS region	transcription start site region 10853
Tssr10854	1	194986615 to 194986641	26	+	TSS region	transcription start site region 10854
Tssr10855	1	194986649 to 194986683	34	+	TSS region	transcription start site region 10855
Gm32250	1	194989062 to 194995345	6283	-	lincRNA gene	predicted gene, 32250
Tssr10856	1	194991248 to 194991257	9	+	TSS region	transcription start site region 10856