Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:194777232-195007240

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxna2 1 194619829 to 194816869 197040 + protein coding gene plexin A2
Gm19777 1 194819730 to 194820087 357 - pseudogene predicted gene, 19777
Mir3962 1 194822001 to 194822064 63 + miRNA gene microRNA 3962
Gm23885 1 194858657 to 194858950 293 + unclassified non-coding RNA gene predicted gene, 23885
Cpgi1247 1 194879514 to 194879672 158 CpG island CpG island 1247
Gm39748 1 194886446 to 194901237 14791 - lncRNA gene predicted gene, 39748
Tssr382 1 194892232 to 194892240 8 + TSS region transcription start site region 382
Cpgi1248 1 194938779 to 194939207 428 CpG island CpG island 1248
Cd34 1 194938819 to 194961279 22460 + protein coding gene CD34 antigen
Tssr10844 1 194938838 to 194938845 7 + TSS region transcription start site region 10844
Tssr10845 1 194938870 to 194938968 98 + TSS region transcription start site region 10845
Tssr10846 1 194938970 to 194938981 11 + TSS region transcription start site region 10846
Tssr10847 1 194943853 to 194943866 13 + TSS region transcription start site region 10847
Gm16897 1 194955759 to 194976959 21200 - antisense lncRNA gene predicted gene, 16897
Gm39749 1 194967967 to 194970875 2908 - lncRNA gene predicted gene, 39749
Cpgi1249 1 194976051 to 194977075 1024 CpG island CpG island 1249
Tssr10848 1 194976342 to 194976391 49 + TSS region transcription start site region 10848
Tssr10849 1 194976400 to 194976431 31 + TSS region transcription start site region 10849
Tssr10850 1 194977054 to 194977059 5 + TSS region transcription start site region 10850
Tssr10851 1 194981143 to 194981148 5 + TSS region transcription start site region 10851
Tssr10852 1 194986519 to 194986544 25 + TSS region transcription start site region 10852
Tssr10853 1 194986594 to 194986611 17 + TSS region transcription start site region 10853
Tssr10854 1 194986615 to 194986641 26 + TSS region transcription start site region 10854
Tssr10855 1 194986649 to 194986683 34 + TSS region transcription start site region 10855
Gm32250 1 194989062 to 194995345 6283 - lincRNA gene predicted gene, 32250
Tssr10856 1 194991248 to 194991257 9 + TSS region transcription start site region 10856
Gm37334 1 194993258 to 194996195 2937 + unclassified gene predicted gene, 37334
Tssr10857 1 194995510 to 194995520 10 + TSS region transcription start site region 10857
Tssr15867 1 194999444 to 194999472 28 - TSS region transcription start site region 15867