Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:194743657-194973950

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plxna2 1 194619829 to 194816869 197040 + protein coding gene plexin A2
Tssr381 1 194744121 to 194744124 3 + TSS region transcription start site region 381
Tssr10842 1 194749467 to 194749480 13 + TSS region transcription start site region 10842
Tssr10843 1 194749482 to 194749499 17 + TSS region transcription start site region 10843
Tssr15866 1 194774883 to 194774914 31 - TSS region transcription start site region 15866
Gm19777 1 194819730 to 194820087 357 - pseudogene predicted gene, 19777
Mir3962 1 194822001 to 194822064 63 + miRNA gene microRNA 3962
Gm23885 1 194858657 to 194858950 293 + unclassified non-coding RNA gene predicted gene, 23885
Cpgi1247 1 194879514 to 194879672 158 CpG island CpG island 1247
Gm39748 1 194886446 to 194901237 14791 - lncRNA gene predicted gene, 39748
Tssr382 1 194892232 to 194892240 8 + TSS region transcription start site region 382
Cpgi1248 1 194938779 to 194939207 428 CpG island CpG island 1248
Cd34 1 194938819 to 194961279 22460 + protein coding gene CD34 antigen
Tssr10844 1 194938838 to 194938845 7 + TSS region transcription start site region 10844
Tssr10845 1 194938870 to 194938968 98 + TSS region transcription start site region 10845
Tssr10846 1 194938970 to 194938981 11 + TSS region transcription start site region 10846
Tssr10847 1 194943853 to 194943866 13 + TSS region transcription start site region 10847
Gm16897 1 194955759 to 194976959 21200 - antisense lncRNA gene predicted gene, 16897
Gm39749 1 194967967 to 194970875 2908 - lncRNA gene predicted gene, 39749