Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:193303624-193873665

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lamb3 1 193294353 to 193343878 49525 + protein coding gene laminin, beta 3
Tssr10830 1 193326003 to 193326006 3 + TSS region transcription start site region 10830
Cpgi1244 1 193330055 to 193330270 215 CpG island CpG island 1244
Tssr10831 1 193332278 to 193332285 7 + TSS region transcription start site region 10831
Tssr10832 1 193334954 to 193334965 11 + TSS region transcription start site region 10832
Tssr379 1 193338568 to 193338587 19 + TSS region transcription start site region 379
Camk1g 1 193346346 to 193370298 23952 - protein coding gene calcium/calmodulin-dependent protein kinase I gamma
Tssr380 1 193360039 to 193360043 4 + TSS region transcription start site region 380
Gm37942 1 193366840 to 193367467 627 + unclassified gene predicted gene, 37942
Tssr15855 1 193370233 to 193370255 22 - TSS region transcription start site region 15855
Tssr15856 1 193370260 to 193370287 27 - TSS region transcription start site region 15856
Gm38022 1 193475290 to 193475692 402 + pseudogene predicted gene, 38022
Gm31753 1 193478803 to 193485017 6214 + lncRNA gene predicted gene, 31753
Gm38322 1 193493587 to 193495886 2299 + unclassified gene predicted gene, 38322
4631405K08Rik 1 193507238 to 193510174 2936 - lincRNA gene RIKEN cDNA 4631405K08 gene
Mir205 1 193507463 to 193507530 67 - miRNA gene microRNA 205
Tssr15857 1 193508463 to 193508474 11 - TSS region transcription start site region 15857
Tssr15858 1 193510024 to 193510034 10 - TSS region transcription start site region 15858
Tssr15859 1 193510080 to 193510089 9 - TSS region transcription start site region 15859
Tssr15860 1 193510124 to 193510133 9 - TSS region transcription start site region 15860
Tssr15861 1 193510169 to 193510177 8 - TSS region transcription start site region 15861
Tssr15862 1 193510202 to 193510216 14 - TSS region transcription start site region 15862
Tssr15863 1 193588624 to 193588665 41 - TSS region transcription start site region 15863
Tssr10833 1 193611216 to 193611219 3 + TSS region transcription start site region 10833
Tssr10834 1 193632696 to 193632724 28 + TSS region transcription start site region 10834
Cpgi1245 1 193632716 to 193632896 180 CpG island CpG island 1245
Gm31870 1 193655516 to 193749308 93792 + lncRNA gene predicted gene, 31870
Tssr10835 1 193655635 to 193655668 33 + TSS region transcription start site region 10835
Gm21362 1 193867009 to 193867936 927 + pseudogene predicted gene, 21362