Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:193191507-193291533

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Traf3ip3 1 193175504 to 193201546 26042 - protein coding gene TRAF3 interacting protein 3
Gm15872 1 193187274 to 193192379 5105 + antisense lncRNA gene predicted gene 15872
Tssr15842 1 193197893 to 193197906 13 - TSS region transcription start site region 15842
Tssr15843 1 193197950 to 193198031 81 - TSS region transcription start site region 15843
Tssr15844 1 193201137 to 193201158 21 - TSS region transcription start site region 15844
Tssr15845 1 193201394 to 193201417 23 - TSS region transcription start site region 15845
Tssr15846 1 193201435 to 193201584 149 - TSS region transcription start site region 15846
Tssr15847 1 193201597 to 193201608 11 - TSS region transcription start site region 15847
4930570N18Rik 1 193203038 to 193226208 23170 + antisense lncRNA gene RIKEN cDNA 4930570N18 gene
Tssr10821 1 193207708 to 193207730 22 + TSS region transcription start site region 10821
Hsd11b1 1 193221640 to 193264049 42409 - protein coding gene hydroxysteroid 11-beta dehydrogenase 1
D1Mit512 1 193241186 to 193241301 115 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 512
Tssr15848 1 193241507 to 193241533 26 - TSS region transcription start site region 15848
Tssr15849 1 193242346 to 193242368 22 - TSS region transcription start site region 15849
Tssr15850 1 193242426 to 193242433 7 - TSS region transcription start site region 15850
Gm38118 1 193259616 to 193261837 2221 - unclassified gene predicted gene, 38118
Tssr15851 1 193263993 to 193264004 11 - TSS region transcription start site region 15851
Tssr15852 1 193264006 to 193264079 73 - TSS region transcription start site region 15852
G0s2 1 193272160 to 193273188 1028 - protein coding gene G0/G1 switch gene 2
Cpgi1243 1 193272467 to 193272751 284 CpG island CpG island 1243
Tssr15853 1 193273099 to 193273117 18 - TSS region transcription start site region 15853
Tssr10822 1 193274601 to 193274612 11 + TSS region transcription start site region 10822
Tssr15854 1 193275083 to 193275090 7 - TSS region transcription start site region 15854
Gm37691 1 193281271 to 193283843 2572 + unclassified gene predicted gene, 37691
Gm37650 1 193289766 to 193290889 1123 - antisense lncRNA gene predicted gene, 37650