Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:193191186-193291301

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Traf3ip3	1	193175504 to 193201546	26042	-	protein coding gene	TRAF3 interacting protein 3
Gm15872	1	193187274 to 193192379	5105	+	antisense lncRNA gene	predicted gene 15872
Tssr15842	1	193197893 to 193197906	13	-	TSS region	transcription start site region 15842
Tssr15843	1	193197950 to 193198031	81	-	TSS region	transcription start site region 15843
Tssr15844	1	193201137 to 193201158	21	-	TSS region	transcription start site region 15844
Tssr15845	1	193201394 to 193201417	23	-	TSS region	transcription start site region 15845
Tssr15846	1	193201435 to 193201584	149	-	TSS region	transcription start site region 15846
Tssr15847	1	193201597 to 193201608	11	-	TSS region	transcription start site region 15847
4930570N18Rik	1	193203038 to 193226208	23170	+	antisense lncRNA gene	RIKEN cDNA 4930570N18 gene
Tssr10821	1	193207708 to 193207730	22	+	TSS region	transcription start site region 10821
Hsd11b1	1	193221640 to 193264049	42409	-	protein coding gene	hydroxysteroid 11-beta dehydrogenase 1
D1Mit512	1	193241186 to 193241301	115		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 512
Tssr15848	1	193241507 to 193241533	26	-	TSS region	transcription start site region 15848
Tssr15849	1	193242346 to 193242368	22	-	TSS region	transcription start site region 15849
Tssr15850	1	193242426 to 193242433	7	-	TSS region	transcription start site region 15850
Gm38118	1	193259616 to 193261837	2221	-	unclassified gene	predicted gene, 38118
Tssr15851	1	193263993 to 193264004	11	-	TSS region	transcription start site region 15851
Tssr15852	1	193264006 to 193264079	73	-	TSS region	transcription start site region 15852
G0s2	1	193272160 to 193273188	1028	-	protein coding gene	G0/G1 switch gene 2
Cpgi1243	1	193272467 to 193272751	284		CpG island	CpG island 1243
Tssr15853	1	193273099 to 193273117	18	-	TSS region	transcription start site region 15853
Tssr10822	1	193274601 to 193274612	11	+	TSS region	transcription start site region 10822
Tssr15854	1	193275083 to 193275090	7	-	TSS region	transcription start site region 15854
Gm37691	1	193281271 to 193283843	2572	+	unclassified gene	predicted gene, 37691
Gm37650	1	193289766 to 193290889	1123	-	antisense lncRNA gene	predicted gene, 37650