Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:193074733-193185453

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39747 1 193048660 to 193100390 51730 + lncRNA gene predicted gene, 39747
Utp25 1 193104403 to 193130251 25848 - protein coding gene UTP25 small subunit processome component
Cpgi1240 1 193129733 to 193130453 720 CpG island CpG island 1240
Tssr15838 1 193130201 to 193130257 56 - TSS region transcription start site region 15838
Tssr15839 1 193130258 to 193130271 13 - TSS region transcription start site region 15839
Tssr10811 1 193145284 to 193145296 12 + TSS region transcription start site region 10811
Cpgi1241 1 193152813 to 193153519 706 CpG island CpG island 1241
Tssr10812 1 193153107 to 193153116 9 + TSS region transcription start site region 10812
Irf6 1 193153111 to 193172023 18912 + protein coding gene interferon regulatory factor 6
Tssr10813 1 193153121 to 193153165 44 + TSS region transcription start site region 10813
Tssr10814 1 193153167 to 193153179 12 + TSS region transcription start site region 10814
Tssr10815 1 193153189 to 193153199 10 + TSS region transcription start site region 10815
Tssr10816 1 193156663 to 193156678 15 + TSS region transcription start site region 10816
Tssr10817 1 193156765 to 193156813 48 + TSS region transcription start site region 10817
Cpgi1242 1 193173213 to 193173993 780 CpG island CpG island 1242
Tssr15840 1 193173375 to 193173389 14 - TSS region transcription start site region 15840
Tssr15841 1 193173398 to 193173418 20 - TSS region transcription start site region 15841
A130010J15Rik 1 193173469 to 193177837 4368 + protein coding gene RIKEN cDNA A130010J15 gene
Tssr10818 1 193173574 to 193173595 21 + TSS region transcription start site region 10818
Tssr10819 1 193173736 to 193173757 21 + TSS region transcription start site region 10819
Traf3ip3 1 193175504 to 193201546 26042 - protein coding gene TRAF3 interacting protein 3