Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:192915651-193155728

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mptp1 1 171804480 to 192998742 21194262 QTL MPTP sensitivity 1
Syt14 1 192891233 to 193035775 144542 - protein coding gene synaptotagmin XIV
Gm39746 1 192918061 to 192923113 5052 - lncRNA gene predicted gene, 39746
Tssr15835 1 192992453 to 192992466 13 - TSS region transcription start site region 15835
Gm23583 1 192998286 to 192998574 288 - unclassified non-coding RNA gene predicted gene, 23583
D1Mit293 1 192998594 to 192998742 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 293
Cpgi1239 1 193034908 to 193036328 1420 CpG island CpG island 1239
Tssr15836 1 193035651 to 193035728 77 - TSS region transcription start site region 15836
Tssr15837 1 193035756 to 193035830 74 - TSS region transcription start site region 15837
Gm31406 1 193040973 to 193042405 1432 - lincRNA gene predicted gene, 31406
Gm39747 1 193048660 to 193100390 51730 + lncRNA gene predicted gene, 39747
Gm37103 1 193052500 to 193052614 114 + pseudogene predicted gene, 37103
Utp25 1 193104403 to 193130251 25848 - protein coding gene UTP25 small subunit processome component
Cpgi1240 1 193129733 to 193130453 720 CpG island CpG island 1240
Tssr15838 1 193130201 to 193130257 56 - TSS region transcription start site region 15838
Tssr15839 1 193130258 to 193130271 13 - TSS region transcription start site region 15839
Tssr10811 1 193145284 to 193145296 12 + TSS region transcription start site region 10811
Cpgi1241 1 193152813 to 193153519 706 CpG island CpG island 1241
Tssr10812 1 193153107 to 193153116 9 + TSS region transcription start site region 10812
Irf6 1 193153111 to 193172023 18912 + protein coding gene interferon regulatory factor 6
Tssr10813 1 193153121 to 193153165 44 + TSS region transcription start site region 10813
Tssr10814 1 193153167 to 193153179 12 + TSS region transcription start site region 10814
Tssr10815 1 193153189 to 193153199 10 + TSS region transcription start site region 10815