Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:191977205-192112559

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr10797	1	191977368 to 191977389	21	+	TSS region	transcription start site region 10797
Rd3	1	191977370 to 191988283	10913	+	protein coding gene	retinal degeneration 3
Tssr10798	1	191977393 to 191977400	7	+	TSS region	transcription start site region 10798
Tssr10799	1	191977401 to 191977445	44	+	TSS region	transcription start site region 10799
Tssr10800	1	191978247 to 191978259	12	+	TSS region	transcription start site region 10800
Tssr10801	1	191978284 to 191978291	7	+	TSS region	transcription start site region 10801
Cpgi1229	1	191985177 to 191985586	409		CpG island	CpG island 1229
Gm26670	1	191986832 to 191990138	3306	-	antisense lncRNA gene	predicted gene, 26670
Cpgi1230	1	191989858 to 191990295	437		CpG island	CpG island 1230
Tssr15808	1	191990142 to 191990155	13	-	TSS region	transcription start site region 15808
Gm32460	1	191992861 to 191993092	231	+	pseudogene	predicted gene, 32460
Traf5	1	191997205 to 192092559	95354	-	protein coding gene	TNF receptor-associated factor 5
Mir3473c	1	191998554 to 191998634	80	-	miRNA gene	microRNA 3473c
D1Mit463	1	191998812 to 191998936	124		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 463
Tssr15809	1	192061722 to 192061736	14	-	TSS region	transcription start site region 15809
Tssr15810	1	192061823 to 192061844	21	-	TSS region	transcription start site region 15810
Tssr15811	1	192064611 to 192064641	30	-	TSS region	transcription start site region 15811
Gstp-ps	1	192073820 to 192074450	630	-	pseudogene	glutathione S-transferase, pi, pseudogene
Tssr15812	1	192074013 to 192074036	23	-	TSS region	transcription start site region 15812
Tssr15813	1	192074322 to 192074353	31	-	TSS region	transcription start site region 15813
Tssr15814	1	192074466 to 192074491	25	-	TSS region	transcription start site region 15814
Tssr15815	1	192074523 to 192074529	6	-	TSS region	transcription start site region 15815
Cpgi1231	1	192091884 to 192092792	908		CpG island	CpG island 1231
Gm26879	1	192092355 to 192099628	7273	+	antisense lncRNA gene	predicted gene, 26879
Tssr15816	1	192092366 to 192092375	9	-	TSS region	transcription start site region 15816
Tssr15817	1	192092420 to 192092425	5	-	TSS region	transcription start site region 15817
Tssr15818	1	192092427 to 192092455	28	-	TSS region	transcription start site region 15818
Tssr15819	1	192092458 to 192092469	11	-	TSS region	transcription start site region 15819
Tssr15820	1	192092540 to 192092619	79	-	TSS region	transcription start site region 15820
Rcor3	1	192098546 to 192138062	39516	-	protein coding gene	REST corepressor 3
Tssr15821	1	192099290 to 192099293	3	-	TSS region	transcription start site region 15821
Tssr15822	1	192099789 to 192099791	2	-	TSS region	transcription start site region 15822