Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:191908247-192048259

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc30a1 1 191906767 to 191913247 6480 + protein coding gene solute carrier family 30 (zinc transporter), member 1
Tssr10794 1 191911689 to 191911692 3 + TSS region transcription start site region 10794
Gm39742 1 191928570 to 191930235 1665 + lncRNA gene predicted gene, 39742
Tssr10795 1 191928588 to 191928611 23 + TSS region transcription start site region 10795
Tssr10796 1 191928641 to 191928650 9 + TSS region transcription start site region 10796
Gm39743 1 191937883 to 191941047 3164 + protein coding gene predicted gene, 39743
Tssr378 1 191957906 to 191957910 4 + TSS region transcription start site region 378
Tssr10797 1 191977368 to 191977389 21 + TSS region transcription start site region 10797
Rd3 1 191977370 to 191988283 10913 + protein coding gene retinal degeneration 3
Tssr10798 1 191977393 to 191977400 7 + TSS region transcription start site region 10798
Tssr10799 1 191977401 to 191977445 44 + TSS region transcription start site region 10799
Tssr10800 1 191978247 to 191978259 12 + TSS region transcription start site region 10800
Tssr10801 1 191978284 to 191978291 7 + TSS region transcription start site region 10801
Cpgi1229 1 191985177 to 191985586 409 CpG island CpG island 1229
Gm26670 1 191986832 to 191990138 3306 - antisense lncRNA gene predicted gene, 26670
Cpgi1230 1 191989858 to 191990295 437 CpG island CpG island 1230
Tssr15808 1 191990142 to 191990155 13 - TSS region transcription start site region 15808
Gm32460 1 191992861 to 191993092 231 + pseudogene predicted gene, 32460
Traf5 1 191997205 to 192092559 95354 - protein coding gene TNF receptor-associated factor 5
Mir3473c 1 191998554 to 191998634 80 - miRNA gene microRNA 3473c
D1Mit463 1 191998812 to 191998936 124 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 463