Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:191806767-192013247

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr10786	1	191817385 to 191817401	16	+	TSS region	transcription start site region 10786
5430414B12Rik	1	191817395 to 191819541	2146		lncRNA gene	RIKEN cDNA 5430414B12 gene
Tssr10787	1	191817439 to 191817452	13	+	TSS region	transcription start site region 10787
Tssr10788	1	191817467 to 191817478	11	+	TSS region	transcription start site region 10788
Gm38037	1	191820370 to 191821993	1623	-	antisense lncRNA gene	predicted gene, 38037
Cpgi1226	1	191820988 to 191822225	1237		CpG island	CpG island 1226
Nek2	1	191821444 to 191833050	11606	+	protein coding gene	NIMA (never in mitosis gene a)-related expressed kinase 2
Tssr10789	1	191821476 to 191821489	13	+	TSS region	transcription start site region 10789
Tssr10790	1	191821492 to 191821568	76	+	TSS region	transcription start site region 10790
Gm20585	1	191827909 to 191828606	697	+	pseudogene	predicted gene, 20585
Cpgi1227	1	191834852 to 191835124	272		CpG island	CpG island 1227
Tssr15804	1	191872180 to 191872193	13	-	TSS region	transcription start site region 15804
Tssr15805	1	191872196 to 191872211	15	-	TSS region	transcription start site region 15805
1700034H15Rik	1	191894072 to 191907527	13455	-	antisense lncRNA gene	RIKEN cDNA 1700034H15 gene
Tssr15806	1	191899177 to 191899208	31	-	TSS region	transcription start site region 15806
Cpgi1228	1	191905958 to 191907921	1963		CpG island	CpG island 1228
Tssr10791	1	191906743 to 191906767	24	+	TSS region	transcription start site region 10791
Slc30a1	1	191906767 to 191913247	6480	+	protein coding gene	solute carrier family 30 (zinc transporter), member 1
Tssr10792	1	191906776 to 191906795	19	+	TSS region	transcription start site region 10792
Tssr10793	1	191906807 to 191906823	16	+	TSS region	transcription start site region 10793
Tssr15807	1	191907582 to 191907607	25	-	TSS region	transcription start site region 15807
Tssr10794	1	191911689 to 191911692	3	+	TSS region	transcription start site region 10794
Gm39742	1	191928570 to 191930235	1665	+	lncRNA gene	predicted gene, 39742
Tssr10795	1	191928588 to 191928611	23	+	TSS region	transcription start site region 10795
Tssr10796	1	191928641 to 191928650	9	+	TSS region	transcription start site region 10796
Gm39743	1	191937883 to 191941047	3164	+	protein coding gene	predicted gene, 39743
Tssr378	1	191957906 to 191957910	4	+	TSS region	transcription start site region 378
Tssr10797	1	191977368 to 191977389	21	+	TSS region	transcription start site region 10797
Rd3	1	191977370 to 191988283	10913	+	protein coding gene	retinal degeneration 3
Tssr10798	1	191977393 to 191977400	7	+	TSS region	transcription start site region 10798
Tssr10799	1	191977401 to 191977445	44	+	TSS region	transcription start site region 10799
Tssr10800	1	191978247 to 191978259	12	+	TSS region	transcription start site region 10800
Tssr10801	1	191978284 to 191978291	7	+	TSS region	transcription start site region 10801
Cpgi1229	1	191985177 to 191985586	409		CpG island	CpG island 1229
Gm26670	1	191986832 to 191990138	3306	-	antisense lncRNA gene	predicted gene, 26670
Cpgi1230	1	191989858 to 191990295	437		CpG island	CpG island 1230
Tssr15808	1	191990142 to 191990155	13	-	TSS region	transcription start site region 15808
Gm32460	1	191992861 to 191993092	231	+	pseudogene	predicted gene, 32460
Traf5	1	191997205 to 192092559	95354	-	protein coding gene	TNF receptor-associated factor 5
Mir3473c	1	191998554 to 191998634	80	-	miRNA gene	microRNA 3473c
D1Mit463	1	191998812 to 191998936	124		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 463