Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:191390910-191593905

38 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nobq3	1	104005680 to 191493284	87487604		QTL	New Zealand obese QTL 3
Liq1	1	167758517 to 191493284	23734767		QTL	limb inflammation QTL 1
Ppp2r5a	1	191351981 to 191397041	45060	-	protein coding gene	protein phosphatase 2, regulatory subunit B', alpha
Tssr15787	1	191393687 to 191393691	4	-	TSS region	transcription start site region 15787
Cpgi1223	1	191395914 to 191397916	2002		CpG island	CpG island 1223
Tssr374	1	191396091 to 191396127	36	-	TSS region	transcription start site region 374
Tssr15788	1	191396567 to 191396592	25	-	TSS region	transcription start site region 15788
Tssr15789	1	191396922 to 191396962	40	-	TSS region	transcription start site region 15789
Tssr15790	1	191397026 to 191397041	15	-	TSS region	transcription start site region 15790
Tssr15791	1	191397044 to 191397061	17	-	TSS region	transcription start site region 15791
Tssr375	1	191397208 to 191397234	26	-	TSS region	transcription start site region 375
Gm20201	1	191397705 to 191415085	17380	-	lncRNA gene	predicted gene, 20201
Tssr15792	1	191403270 to 191403273	3	-	TSS region	transcription start site region 15792
D1Mit292	1	191403465 to 191403660	195		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 292
Gm2272	1	191407666 to 191408247	581	+	pseudogene	predicted gene 2272
Gm31987	1	191420174 to 191433682	13508	-	lncRNA gene	predicted gene, 31987
Gm32128	1	191420844 to 191422644	1800	+	lncRNA gene	predicted gene, 32128
Gm32200	1	191436340 to 191465048	28708	-	lincRNA gene	predicted gene, 32200
Tssr15793	1	191445803 to 191445818	15	-	TSS region	transcription start site region 15793
Tssr15794	1	191465323 to 191465343	20	-	TSS region	transcription start site region 15794
Gm37688	1	191477331 to 191477795	464	+	pseudogene	predicted gene, 37688
Gm32334	1	191487317 to 191491677	4360	+	lncRNA gene	predicted gene, 32334
Gm37432	1	191490910 to 191493905	2995	-	lincRNA gene	predicted gene, 37432
D1Mit209	1	191493187 to 191493284	97		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 209
Tssr376	1	191507878 to 191507880	2	+	TSS region	transcription start site region 376
Tssr15795	1	191519831 to 191519842	11	-	TSS region	transcription start site region 15795
9430037O13Rik	1	191535885 to 191536892	1007	-	unclassified gene	RIKEN cDNA 9430037O13 gene
Tssr377	1	191536575 to 191536578	3	-	TSS region	transcription start site region 377
Dtl	1	191537356 to 191575544	38188	-	protein coding gene	denticleless E3 ubiquitin protein ligase
Tssr15796	1	191541070 to 191541083	13	-	TSS region	transcription start site region 15796
Tssr15797	1	191541359 to 191541366	7	-	TSS region	transcription start site region 15797
Tssr15798	1	191565903 to 191565913	10	-	TSS region	transcription start site region 15798
Cpgi1224	1	191574838 to 191576305	1467		CpG island	CpG island 1224
Tssr15799	1	191575490 to 191575526	36	-	TSS region	transcription start site region 15799
Tssr15800	1	191575537 to 191575549	12	-	TSS region	transcription start site region 15800
Tssr15801	1	191575550 to 191575557	7	-	TSS region	transcription start site region 15801
Ints7	1	191575636 to 191623688	48052	+	protein coding gene	integrator complex subunit 7
Tssr10773	1	191575721 to 191575792	71	+	TSS region	transcription start site region 10773