Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:189971515-190171637

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm39736	1	190039479 to 190045148	5669	-	lncRNA gene	predicted gene, 39736
Gm30446	1	190048724 to 190091303	42579	+	lncRNA gene	predicted gene, 30446
Tssr10700	1	190059323 to 190059325	2	+	TSS region	transcription start site region 10700
D1Mit56	1	190071515 to 190071637	122		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 56
Tssr370	1	190116784 to 190116787	3	+	TSS region	transcription start site region 370
Prox1	1	190118035 to 190170680	52645	-	protein coding gene	prospero homeobox 1
Tssr15729	1	190144207 to 190144210	3	-	TSS region	transcription start site region 15729
Tssr15730	1	190144495 to 190144520	25	-	TSS region	transcription start site region 15730
Tssr15731	1	190144551 to 190144561	10	-	TSS region	transcription start site region 15731
Tssr10701	1	190159792 to 190159817	25	+	TSS region	transcription start site region 10701
Cpgi1203	1	190161163 to 190161438	275		CpG island	CpG island 1203
Gm28172	1	190168670 to 190169633	963	+	antisense lncRNA gene	predicted gene 28172
Cpgi1204	1	190168806 to 190169569	763		CpG island	CpG island 1204
Tssr15732	1	190169506 to 190169526	20	-	TSS region	transcription start site region 15732
Cpgi1205	1	190170021 to 190171056	1035		CpG island	CpG island 1205
Tssr15733	1	190170178 to 190170212	34	-	TSS region	transcription start site region 15733
Tssr371	1	190170263 to 190170268	5	+	TSS region	transcription start site region 371
Tssr10702	1	190170281 to 190170301	20	+	TSS region	transcription start site region 10702
Prox1os	1	190170296 to 190217276	46980	+	antisense lncRNA gene	prospero homeobox 1, opposite strand
Tssr10703	1	190170322 to 190170331	9	+	TSS region	transcription start site region 10703
Tssr10704	1	190170341 to 190170358	17	+	TSS region	transcription start site region 10704
Tssr15734	1	190170671 to 190170744	73	-	TSS region	transcription start site region 15734
Tssr15735	1	190170821 to 190170832	11	-	TSS region	transcription start site region 15735
Tssr10705	1	190171085 to 190171087	2	+	TSS region	transcription start site region 10705