Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:189718268-189886695

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi1199	1	189727390 to 189729045	1655		CpG island	CpG island 1199
Tssr10688	1	189728248 to 189728259	11	+	TSS region	transcription start site region 10688
Tssr10689	1	189728264 to 189728326	62	+	TSS region	transcription start site region 10689
Ptpn14	1	189728268 to 189876695	148427	+	protein coding gene	protein tyrosine phosphatase, non-receptor type 14
Tssr10690	1	189728330 to 189728337	7	+	TSS region	transcription start site region 10690
Tssr15719	1	189729656 to 189729671	15	-	TSS region	transcription start site region 15719
Tssr15720	1	189755173 to 189755180	7	-	TSS region	transcription start site region 15720
Tssr10691	1	189775019 to 189775061	42	+	TSS region	transcription start site region 10691
Tssr10692	1	189782004 to 189782012	8	+	TSS region	transcription start site region 10692
Tssr10693	1	189785259 to 189785272	13	+	TSS region	transcription start site region 10693
Cpgi1200	1	189786670 to 189787028	358		CpG island	CpG island 1200
Tssr10694	1	189798526 to 189798538	12	+	TSS region	transcription start site region 10694
Cpgi1201	1	189799057 to 189799240	183		CpG island	CpG island 1201
V25Dq2	1	189800000 to 189800000	0		QTL	vitamin D inactive form serum level QTL 2
Tssr10695	1	189827213 to 189827228	15	+	TSS region	transcription start site region 10695
Gm30280	1	189827230 to 189827491	261	+	pseudogene	predicted gene, 30280
Gm26574	1	189833141 to 189836620	3479	-	antisense lncRNA gene	predicted gene, 26574
Tssr10696	1	189844663 to 189844669	6	+	TSS region	transcription start site region 10696
Tssr10697	1	189860375 to 189860386	11	+	TSS region	transcription start site region 10697
Tssr15721	1	189867178 to 189867187	9	-	TSS region	transcription start site region 15721
Tssr10698	1	189879903 to 189879910	7	+	TSS region	transcription start site region 10698
Tssr10699	1	189879929 to 189879941	12	+	TSS region	transcription start site region 10699
Gm37422	1	189879935 to 189884652	4717	+	antisense lncRNA gene	predicted gene, 37422
Smyd2	1	189880492 to 189922363	41871	-	protein coding gene	SET and MYND domain containing 2
Tssr15722	1	189883977 to 189883999	22	-	TSS region	transcription start site region 15722