Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:189037930-189572273

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hbnr4 1 147249520 to 189251027 42001507 QTL Heligmosomoides bakeri nematode resistance 4
Bmd1 1 156774467 to 189571420 32796953 QTL bone mineral density 1
Lmr8 1 156774467 to 189571420 32796953 QTL leishmaniasis resistance 8
Mop3 1 167929168 to 189571420 21642252 QTL morphine preference 3
Scfr1 1 171804480 to 189571420 17766940 QTL stem cell frequency regulator 1
Bmd1c 1 186177593 to 189571420 3393827 QTL bone mineral density 1c
Sle1c 1 188862317 to 189571420 709103 QTL systematic lupus erythematosus susceptibility 1c
Gm36561 1 189034750 to 189038588 3838 + lncRNA gene predicted gene, 36561
Gm37178 1 189064895 to 189066433 1538 + unclassified gene predicted gene, 37178
Gm18698 1 189078145 to 189078769 624 - pseudogene predicted gene, 18698
Tssr15710 1 189128135 to 189128142 7 - TSS region transcription start site region 15710
Kcnk2 1 189207930 to 189402273 194343 - protein coding gene potassium channel, subfamily K, member 2
2900042K21Rik 1 189210361 to 189211013 652 - sense overlapping lncRNA gene RIKEN cDNA 2900042K21 gene
Cpgi1194 1 189249919 to 189250356 437 CpG island CpG island 1194
D1Mit362 1 189250913 to 189251027 114 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 362
Tbbmd1 1 189250913 to 189251027 114 QTL total body bone mineral density 1
Pdcd5-ps 1 189277443 to 189277823 380 - pseudogene programmed cell death 5, pseudogene
Tssr15711 1 189277762 to 189277801 39 - TSS region transcription start site region 15711
Cpgi1195 1 189342734 to 189344425 1691 CpG island CpG island 1195
Tssr15712 1 189343342 to 189343358 16 - TSS region transcription start site region 15712
A430027H14Rik 1 189343431 to 189344897 1466 + antisense lncRNA gene RIKEN cDNA A430027H14 gene
Tssr15713 1 189343707 to 189343749 42 - TSS region transcription start site region 15713
Gm24092 1 189393350 to 189393470 120 + miRNA gene predicted gene, 24092
Tssr15714 1 189402748 to 189402761 13 - TSS region transcription start site region 15714
Tssr15715 1 189402762 to 189402770 8 - TSS region transcription start site region 15715
D1Mit153 1 189406727 to 189406961 234 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 153
Gm46177 1 189476447 to 189500338 23891 - lncRNA gene predicted gene, 46177
D1Mit408 1 189505352 to 189505473 121 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 408
Cpgi1196 1 189559811 to 189560255 444 CpG island CpG island 1196
Swrl5 1 189571254 to 189571420 166 QTL SWR lupus locus 5
Tgfbm2 1 189571254 to 189571420 166 QTL transforming growth factor beta, modifier 2
Lmr8b 1 189571254 to 189571420 166 QTL leishmaniasis resistance 8b
D1Mit17 1 189571254 to 189571420 166 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 17
Cpfd2 1 189571254 to 189571420 166 QTL cerebellum pattern fissures, declival 2
Cia9 1 189571420 to 45744740 -143826680 QTL collagen induced arthritis QTL 9
Hcs9 1 189571420 to 63815531 -125755889 QTL hepatocarcinogenesis susceptibility 9