Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Hbnr4 | 1 | 42001507 | QTL | Heligmosomoides bakeri nematode resistance 4 | ||
Splq5 | 1 | 38309193 | QTL | spleen weight QTL 5 | ||
Lgaq3 | 1 | 38309193 | QTL | late growth adjusted QTL 3 | ||
Lgq4 | 1 | 38309193 | QTL | late growth QTL 4 | ||
Bmd1 | 1 | 32796953 | QTL | bone mineral density 1 | ||
Lmr8 | 1 | 32796953 | QTL | leishmaniasis resistance 8 | ||
Mop3 | 1 | 21642252 | QTL | morphine preference 3 | ||
Scfr1 | 1 | 17766940 | QTL | stem cell frequency regulator 1 | ||
Bmd1c | 1 | 3393827 | QTL | bone mineral density 1c | ||
Ush2a | 1 | 702659 | + | protein coding gene | usherin | |
Gm39735 | 1 | 8716 | - | lncRNA gene | predicted gene, 39735 | |
Gm36456 | 1 | 25527 | - | lncRNA gene | predicted gene, 36456 | |
Gm25095 | 1 | 130 | - | snoRNA gene | predicted gene, 25095 | |
D1Mit223 | 1 | 145 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 223 | ||
Tssr369 | 1 | 30 | + | TSS region | transcription start site region 369 | |
Tssr10683 | 1 | 9 | + | TSS region | transcription start site region 10683 | |
Tssr10684 | 1 | 2 | + | TSS region | transcription start site region 10684 | |
Tssr10685 | 1 | 12 | + | TSS region | transcription start site region 10685 | |
Cpgi1192 | 1 | 166 | CpG island | CpG island 1192 | ||
Tssr10686 | 1 | 1 | + | TSS region | transcription start site region 10686 | |
Gm25269 | 1 | 103 | + | snRNA gene | predicted gene, 25269 | |
Sle1c | 1 | 709103 | QTL | systematic lupus erythematosus susceptibility 1c | ||
D1Mit274 | 1 | 145 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 274 | ||
n-TNgtt3 | 1 | 73 | + | tRNA gene | nuclear encoded tRNA asparagine 3 (anticodon GTT) | |
D1Dcr20 | 1 | 98 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 20 | ||
Kctd3 | 1 | 36746 | - | protein coding gene | potassium channel tetramerisation domain containing 3 | |
Tssr15705 | 1 | 23 | - | TSS region | transcription start site region 15705 | |
Tssr15706 | 1 | 41 | - | TSS region | transcription start site region 15706 | |
Cpgi1193 | 1 | 1050 | CpG island | CpG island 1193 | ||
Tssr15707 | 1 | 23 | - | TSS region | transcription start site region 15707 | |
Tssr15708 | 1 | 13 | - | TSS region | transcription start site region 15708 | |
Tssr15709 | 1 | 16 | - | TSS region | transcription start site region 15709 | |
Gm36561 | 1 | 3838 | + | lncRNA gene | predicted gene, 36561 | |
Tssr10687 | 1 | 12 | + | TSS region | transcription start site region 10687 | |
Gm37178 | 1 | 1538 | + | unclassified gene | predicted gene, 37178 | |
Gm18698 | 1 | 624 | - | pseudogene | predicted gene, 18698 | |
Tssr15710 | 1 | 7 | - | TSS region | transcription start site region 15710 | |
Kcnk2 | 1 | 194343 | - | protein coding gene | potassium channel, subfamily K, member 2 | |
2900042K21Rik | 1 | 652 | - | sense overlapping lncRNA gene | RIKEN cDNA 2900042K21 gene | |
Cpgi1194 | 1 | 437 | CpG island | CpG island 1194 | ||
Tbbmd1 | 1 | 114 | QTL | total body bone mineral density 1 | ||
D1Mit362 | 1 | 114 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 362 | ||
Pdcd5-ps | 1 | 380 | - | pseudogene | programmed cell death 5, pseudogene | |
Tssr15711 | 1 | 39 | - | TSS region | transcription start site region 15711 | |
Cpgi1195 | 1 | 1691 | CpG island | CpG island 1195 | ||
Tssr15712 | 1 | 16 | - | TSS region | transcription start site region 15712 | |
A430027H14Rik | 1 | 1466 | + | antisense lncRNA gene | RIKEN cDNA A430027H14 gene | |
Tssr15713 | 1 | 42 | - | TSS region | transcription start site region 15713 | |
Gm24092 | 1 | 120 | + | miRNA gene | predicted gene, 24092 | |
Tssr15714 | 1 | 13 | - | TSS region | transcription start site region 15714 | |
Tssr15715 | 1 | 8 | - | TSS region | transcription start site region 15715 | |
D1Mit153 | 1 | 234 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 153 | ||
Gm46177 | 1 | 23891 | - | lncRNA gene | predicted gene, 46177 | |
D1Mit408 | 1 | 121 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 408 | ||
Cpgi1196 | 1 | 444 | CpG island | CpG island 1196 | ||
Cpfd2 | 1 | 166 | QTL | cerebellum pattern fissures, declival 2 | ||
D1Mit17 | 1 | 166 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 17 | ||
Swrl5 | 1 | 166 | QTL | SWR lupus locus 5 | ||
Tgfbm2 | 1 | 166 | QTL | transforming growth factor beta, modifier 2 | ||
Lmr8b | 1 | 166 | QTL | leishmaniasis resistance 8b | ||
Cia9 | 1 | -143826680 | QTL | collagen induced arthritis QTL 9 | ||
Hcs9 | 1 | -125755889 | QTL | hepatocarcinogenesis susceptibility 9 | ||
Cpgi1197 | 1 | 552 | CpG island | CpG island 1197 | ||
Gm30088 | 1 | 1524 | - | lncRNA gene | predicted gene, 30088 | |
Gm38122 | 1 | 884 | - | unclassified gene | predicted gene, 38122 | |
Cenpf | 1 | 47480 | - | protein coding gene | centromere protein F | |
Tssr15716 | 1 | 10 | - | TSS region | transcription start site region 15716 | |
Gm37239 | 1 | 140 | + | pseudogene | predicted gene, 37239 | |
Cpgi1198 | 1 | 827 | CpG island | CpG island 1198 | ||
Tssr15717 | 1 | 15 | - | TSS region | transcription start site region 15717 | |
Tssr15718 | 1 | 24 | - | TSS region | transcription start site region 15718 | |
Cpgi1199 | 1 | 1655 | CpG island | CpG island 1199 | ||
Tssr10688 | 1 | 11 | + | TSS region | transcription start site region 10688 | |
Tssr10689 | 1 | 62 | + | TSS region | transcription start site region 10689 | |
Ptpn14 | 1 | 148427 | + | protein coding gene | protein tyrosine phosphatase, non-receptor type 14 | |
Tssr10690 | 1 | 7 | + | TSS region | transcription start site region 10690 | |
Tssr15719 | 1 | 15 | - | TSS region | transcription start site region 15719 | |
Tssr15720 | 1 | 7 | - | TSS region | transcription start site region 15720 | |
Tssr10691 | 1 | 42 | + | TSS region | transcription start site region 10691 | |
Tssr10692 | 1 | 8 | + | TSS region | transcription start site region 10692 | |
Tssr10693 | 1 | 13 | + | TSS region | transcription start site region 10693 | |
Cpgi1200 | 1 | 358 | CpG island | CpG island 1200 | ||
Tssr10694 | 1 | 12 | + | TSS region | transcription start site region 10694 | |
Cpgi1201 | 1 | 183 | CpG island | CpG island 1201 | ||
V25Dq2 | 1 | 0 | QTL | vitamin D inactive form serum level QTL 2 | ||
Tssr10695 | 1 | 15 | + | TSS region | transcription start site region 10695 | |
Gm30280 | 1 | 261 | + | pseudogene | predicted gene, 30280 | |
Gm26574 | 1 | 3479 | - | antisense lncRNA gene | predicted gene, 26574 | |
Tssr10696 | 1 | 6 | + | TSS region | transcription start site region 10696 | |
Tssr10697 | 1 | 11 | + | TSS region | transcription start site region 10697 | |
Tssr15721 | 1 | 9 | - | TSS region | transcription start site region 15721 | |
Tssr10698 | 1 | 7 | + | TSS region | transcription start site region 10698 | |
Tssr10699 | 1 | 12 | + | TSS region | transcription start site region 10699 | |
Gm37422 | 1 | 4717 | + | antisense lncRNA gene | predicted gene, 37422 | |
Smyd2 | 1 | 41871 | - | protein coding gene | SET and MYND domain containing 2 | |
Tssr15722 | 1 | 22 | - | TSS region | transcription start site region 15722 | |
D1Mit409 | 1 | 96 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 409 | ||
D1Mit409.1 | 1 | 132 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 409.1 | ||
Tssr15723 | 1 | 22 | - | TSS region | transcription start site region 15723 | |
V25Dq1 | 1 | 0 | QTL | vitamin D inactive form serum level QTL 1 | ||
Tssr15724 | 1 | 4 | - | TSS region | transcription start site region 15724 | |
Gm38245 | 1 | 2620 | - | unclassified gene | predicted gene, 38245 | |
Cpgi1202 | 1 | 1286 | CpG island | CpG island 1202 | ||
Tssr15725 | 1 | 75 | - | TSS region | transcription start site region 15725 | |
Tssr15726 | 1 | 19 | - | TSS region | transcription start site region 15726 | |
Tssr15727 | 1 | 22 | - | TSS region | transcription start site region 15727 | |
Tssr15728 | 1 | 11 | - | TSS region | transcription start site region 15728 | |
D1Mit117 | 1 | 101 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 117 |