Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:188281863-188810579

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17 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgaq3 1 150317922 to 188627115 38309193 QTL late growth adjusted QTL 3
Lgq4 1 150317922 to 188627115 38309193 QTL late growth QTL 4
Splq5 1 150317922 to 188627115 38309193 QTL spleen weight QTL 5
Tssr15704 1 188320830 to 188320834 4 - TSS region transcription start site region 15704
Tssr10682 1 188383100 to 188383112 12 + TSS region transcription start site region 10682
D1Dcr19 1 188419328 to 188419425 97 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 19
Gm39735 1 188541863 to 188550579 8716 - lncRNA gene predicted gene, 39735
Gm36456 1 188583002 to 188608529 25527 - lncRNA gene predicted gene, 36456
Gm25095 1 188622923 to 188623053 130 - snoRNA gene predicted gene, 25095
D1Mit223 1 188626970 to 188627115 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 223
Tssr369 1 188654651 to 188654681 30 + TSS region transcription start site region 369
Tssr10683 1 188654683 to 188654692 9 + TSS region transcription start site region 10683
Tssr10684 1 188680499 to 188680501 2 + TSS region transcription start site region 10684
Tssr10685 1 188680587 to 188680599 12 + TSS region transcription start site region 10685
Cpgi1192 1 188714184 to 188714350 166 CpG island CpG island 1192
Tssr10686 1 188727011 to 188727012 1 + TSS region transcription start site region 10686
Gm25269 1 188760476 to 188760579 103 + snRNA gene predicted gene, 25269