Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:185448084-186308885

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Shali5 1 155706491 to 186261999 30555508 QTL survival time to hyperoxic acute lung injury 5
Emo1 1 163149528 to 186261999 23112471 QTL emotionality 1
Gm2061 1 185447116 to 185455568 8452 - lincRNA gene predicted gene 2061
Tssr15673 1 185451601 to 185451620 19 - TSS region transcription start site region 15673
Tssr15674 1 185451622 to 185451656 34 - TSS region transcription start site region 15674
Cpgi1173 1 185454713 to 185455754 1041 CpG island CpG island 1173
Tssr10615 1 185454775 to 185454800 25 + TSS region transcription start site region 10615
Tssr10616 1 185454803 to 185454817 14 + TSS region transcription start site region 10616
Slc30a10 1 185454848 to 185468762 13914 + protein coding gene solute carrier family 30, member 10
Tssr10617 1 185454913 to 185454931 18 + TSS region transcription start site region 10617
Tssr10618 1 185454980 to 185454995 15 + TSS region transcription start site region 10618
Tssr10619 1 185455052 to 185455088 36 + TSS region transcription start site region 10619
D1Mit208 1 185481626 to 185481760 134 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 208
Scc3 1 185481626 to 185481760 134 QTL colon tumor susceptibility 3
Gm34969 1 185487269 to 185502904 15635 + lncRNA gene predicted gene, 34969
Tssr10620 1 185487288 to 185487299 11 + TSS region transcription start site region 10620
Tssr10621 1 185487328 to 185487344 16 + TSS region transcription start site region 10621
5033404E19Rik 1 185497306 to 185498014 708 + pseudogene RIKEN cDNA 5033404E19 gene
Tssr10622 1 185534380 to 185534413 33 + TSS region transcription start site region 10622
Gm35023 1 185618605 to 185644334 25729 + lncRNA gene predicted gene, 35023
Gm38093 1 185744803 to 185757772 12969 + lincRNA gene predicted gene, 38093
Gm9722 1 185878084 to 185878885 801 - pseudogene predicted gene 9722
Tssr365 1 185969950 to 185969957 7 + TSS region transcription start site region 365
Gm39729 1 186031078 to 186034344 3266 - lncRNA gene predicted gene, 39729
Lyplal1 1 186087732 to 186117310 29578 - protein coding gene lysophospholipase-like 1
Gm38268 1 186112181 to 186112373 192 - unclassified gene predicted gene, 38268
Cpgi1174 1 186116889 to 186117447 558 CpG island CpG island 1174
Tssr15675 1 186117251 to 186117294 43 - TSS region transcription start site region 15675
Gm23821 1 186123201 to 186123306 105 + rRNA gene predicted gene, 23821
Gm35201 1 186137851 to 186154619 16768 + lncRNA gene predicted gene, 35201
Tssr10623 1 186137939 to 186137971 32 + TSS region transcription start site region 10623
Gm37134 1 186177338 to 186223789 46451 + lincRNA gene predicted gene, 37134
D1Mit407 1 186177593 to 186177711 118 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 407
Bmd1c 1 186177593 to 189571420 3393827 QTL bone mineral density 1c
Gm37272 1 186182257 to 186182744 487 + unclassified gene predicted gene, 37272
D1Mit361 1 186261829 to 186261999 170 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361
D1Mit361.3 1 186262012 to 186262127 115 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 361.3