Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:185233057-185333070

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab3gap2 1 185204117 to 185286759 82642 + protein coding gene RAB3 GTPase activating protein subunit 2
Snora36b 1 185242926 to 185243038 112 + snoRNA gene small nucleolar RNA, H/ACA box 36B
Mir664 1 185242975 to 185243043 68 + miRNA gene microRNA 664
Gm34882 1 185243709 to 185247884 4175 - antisense lncRNA gene predicted gene, 34882
Tssr10596 1 185247956 to 185247988 32 + TSS region transcription start site region 10596
Tssr10597 1 185252721 to 185252756 35 + TSS region transcription start site region 10597
Tssr10598 1 185270986 to 185271006 20 + TSS region transcription start site region 10598
Tssr10599 1 185283057 to 185283070 13 + TSS region transcription start site region 10599
Tssr363 1 185283125 to 185283152 27 + TSS region transcription start site region 363
Tssr364 1 185283291 to 185283293 2 + TSS region transcription start site region 364
Iars2 1 185286662 to 185329416 42754 - protein coding gene isoleucine-tRNA synthetase 2, mitochondrial
Tssr10600 1 185312185 to 185312200 15 + TSS region transcription start site region 10600
2010103J01Rik 1 185312187 to 185313803 1616 + antisense lncRNA gene RIKEN cDNA 2010103J01 gene
Mirc38 1 185313319 to 185313692 373 complex/cluster/region microRNA cluster 38, including Mir194-1 through Mir215
Mir194-1 1 185313319 to 185313385 66 + miRNA gene microRNA 194-1
Mir215 1 185313581 to 185313692 111 + miRNA gene microRNA 215
Tssr10601 1 185313670 to 185313674 4 + TSS region transcription start site region 10601
Cpgi1170 1 185328598 to 185329617 1019 CpG island CpG island 1170
Tssr15670 1 185329331 to 185329401 70 - TSS region transcription start site region 15670
Gm37785 1 185329451 to 185331858 2407 + unclassified gene predicted gene, 37785
Cpgi1171 1 185331899 to 185332404 505 CpG island CpG island 1171
Tssr10602 1 185332143 to 185332216 73 + TSS region transcription start site region 10602
Bpnt1 1 185332149 to 185357777 25628 + protein coding gene bisphosphate 3'-nucleotidase 1