Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:182517947-182978281

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr10564 1 182522412 to 182522415 3 + TSS region transcription start site region 10564
Gm8197 1 182546212 to 182547152 940 + pseudogene predicted gene 8197
Gm46081 1 182546371 to 182552656 6285 - pseudogene predicted gene, 46081
Gm46248 1 182560926 to 182564481 3555 + lncRNA gene predicted gene, 46248
Tssr10565 1 182564994 to 182565010 16 + TSS region transcription start site region 10565
Capn8 1 182565007 to 182632352 67345 + protein coding gene calpain 8
Tssr331 1 182565012 to 182565021 9 + TSS region transcription start site region 331
D1Ertd86e 1 182672584 to 182673182 598 unclassified gene DNA segment, Chr 1, ERATO Doi 86, expressed
Tssr10566 1 182679931 to 182679943 12 + TSS region transcription start site region 10566
Gm37516 1 182679939 to 182681892 1953 + unclassified gene predicted gene, 37516
Gm37218 1 182687730 to 182688228 498 + lincRNA gene predicted gene, 37218
Ccdc185 1 182747126 to 182749180 2054 - protein coding gene coiled-coil domain containing 185
Cpgi1149 1 182747947 to 182748281 334 CpG island CpG island 1149
Cpgi1150 1 182748663 to 182749024 361 CpG island CpG island 1150
Tssr15625 1 182749175 to 182749189 14 - TSS region transcription start site region 15625
Cpgi1151 1 182763241 to 182765159 1918 CpG island CpG island 1151
Susd4 1 182763910 to 182896596 132686 + protein coding gene sushi domain containing 4
Tssr10567 1 182763961 to 182764014 53 + TSS region transcription start site region 10567
Tssr10568 1 182764194 to 182764316 122 + TSS region transcription start site region 10568
Tssr10569 1 182861168 to 182861171 3 + TSS region transcription start site region 10569
Gm37542 1 182907710 to 182910541 2831 + unclassified gene predicted gene, 37542
Cpgi1152 1 182954735 to 182955241 506 CpG island CpG island 1152
Tssr10570 1 182954770 to 182954828 58 + TSS region transcription start site region 10570
Tlr5 1 182954788 to 182976044 21256 + protein coding gene toll-like receptor 5
Tssr10571 1 182957641 to 182957650 9 + TSS region transcription start site region 10571
Tssr10572 1 182959114 to 182959123 9 + TSS region transcription start site region 10572
Cpgi1153 1 182960153 to 182960353 200 CpG island CpG island 1153
Tssr10573 1 182965472 to 182965476 4 + TSS region transcription start site region 10573
Gm38079 1 182976276 to 182976429 153 + lincRNA gene predicted gene, 38079