Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:182422412-182622415

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trp53bp2 1 182409172 to 182462432 53260 + protein coding gene transformation related protein 53 binding protein 2
D1Mit360 1 182422914 to 182423027 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 360
Aec2 1 182423027 to 52418578 -130004449 QTL autoimmune exocrinopathy 2
Tssr10555 1 182436308 to 182436311 3 + TSS region transcription start site region 10555
Tssr10556 1 182452708 to 182452718 10 + TSS region transcription start site region 10556
Tssr10557 1 182452724 to 182452745 21 + TSS region transcription start site region 10557
Tssr10558 1 182458601 to 182458612 11 + TSS region transcription start site region 10558
Tssr10559 1 182458645 to 182458656 11 + TSS region transcription start site region 10559
Capn2 1 182467259 to 182517483 50224 - protein coding gene calpain 2
Tssr15616 1 182468614 to 182468620 6 - TSS region transcription start site region 15616
Tssr10560 1 182472183 to 182472186 3 + TSS region transcription start site region 10560
Gm37885 1 182484179 to 182492473 8294 + antisense lncRNA gene predicted gene, 37885
Tssr10561 1 182484195 to 182484212 17 + TSS region transcription start site region 10561
Tssr10562 1 182484225 to 182484241 16 + TSS region transcription start site region 10562
Cpgi1147 1 182489818 to 182490072 254 CpG island CpG island 1147
Tssr10563 1 182490021 to 182490035 14 + TSS region transcription start site region 10563
Gm37069 1 182494156 to 182498297 4141 + unclassified gene predicted gene, 37069
Cpgi1148 1 182516824 to 182517866 1042 CpG island CpG island 1148
Tssr15617 1 182517355 to 182517364 9 - TSS region transcription start site region 15617
Tssr15618 1 182517368 to 182517399 31 - TSS region transcription start site region 15618
Tssr15619 1 182517419 to 182517424 5 - TSS region transcription start site region 15619
Tssr15620 1 182517447 to 182517525 78 - TSS region transcription start site region 15620
Tssr15621 1 182517552 to 182517563 11 - TSS region transcription start site region 15621
Tssr15622 1 182517564 to 182517615 51 - TSS region transcription start site region 15622
Tssr15623 1 182517616 to 182517627 11 - TSS region transcription start site region 15623
Tssr15624 1 182517740 to 182517774 34 - TSS region transcription start site region 15624
Tssr10564 1 182522412 to 182522415 3 + TSS region transcription start site region 10564
Gm8197 1 182546212 to 182547152 940 + pseudogene predicted gene 8197
Gm46081 1 182546371 to 182552656 6285 - pseudogene predicted gene, 46081
Gm46248 1 182560926 to 182564481 3555 + lncRNA gene predicted gene, 46248
Tssr10565 1 182564994 to 182565010 16 + TSS region transcription start site region 10565
Capn8 1 182565007 to 182632352 67345 + protein coding gene calpain 8
Tssr331 1 182565012 to 182565021 9 + TSS region transcription start site region 331