Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:182297543-182488535

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700047M11Rik 1 182300834 to 182303289 2455 + lincRNA gene RIKEN cDNA 1700047M11 gene
Tssr10551 1 182300943 to 182300989 46 + TSS region transcription start site region 10551
Fbxo28 1 182313102 to 182341606 28504 - protein coding gene F-box protein 28
Cpgi1145 1 182340861 to 182341869 1008 CpG island CpG island 1145
Tssr15614 1 182341585 to 182341625 40 - TSS region transcription start site region 15614
Tssr10552 1 182341726 to 182341735 9 + TSS region transcription start site region 10552
Gm5706 1 182392543 to 182393535 992 - pseudogene predicted gene 5706
Tssr15615 1 182403187 to 182403206 19 - TSS region transcription start site region 15615
Gm10517 1 182408264 to 182409021 757 - protein coding gene predicted gene 10517
Cpgi1146 1 182408485 to 182409678 1193 CpG island CpG island 1146
Tssr10553 1 182409162 to 182409184 22 + TSS region transcription start site region 10553
Trp53bp2 1 182409172 to 182462432 53260 + protein coding gene transformation related protein 53 binding protein 2
Tssr10554 1 182409247 to 182409259 12 + TSS region transcription start site region 10554
D1Mit360 1 182422914 to 182423027 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 360
Aec2 1 182423027 to 52418578 -130004449 QTL autoimmune exocrinopathy 2
Tssr10555 1 182436308 to 182436311 3 + TSS region transcription start site region 10555
Tssr10556 1 182452708 to 182452718 10 + TSS region transcription start site region 10556
Tssr10557 1 182452724 to 182452745 21 + TSS region transcription start site region 10557
Tssr10558 1 182458601 to 182458612 11 + TSS region transcription start site region 10558
Tssr10559 1 182458645 to 182458656 11 + TSS region transcription start site region 10559
Capn2 1 182467259 to 182517483 50224 - protein coding gene calpain 2
Tssr15616 1 182468614 to 182468620 6 - TSS region transcription start site region 15616
Tssr10560 1 182472183 to 182472186 3 + TSS region transcription start site region 10560
Gm37885 1 182484179 to 182492473 8294 + antisense lncRNA gene predicted gene, 37885
Tssr10561 1 182484195 to 182484212 17 + TSS region transcription start site region 10561
Tssr10562 1 182484225 to 182484241 16 + TSS region transcription start site region 10562