Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:182251726-182431735

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr10543 1 182255309 to 182255341 32 + TSS region transcription start site region 10543
Tssr10544 1 182255349 to 182255359 10 + TSS region transcription start site region 10544
Tssr10545 1 182255423 to 182255451 28 + TSS region transcription start site region 10545
Gm33887 1 182260983 to 182264817 3834 + protein coding gene predicted gene, 33887
Degs1 1 182275770 to 182282759 6989 - protein coding gene delta(4)-desaturase, sphingolipid 1
Tssr15611 1 182276492 to 182276509 17 - TSS region transcription start site region 15611
Cpgi1144 1 182282089 to 182283084 995 CpG island CpG island 1144
Tssr15612 1 182282218 to 182282239 21 - TSS region transcription start site region 15612
Tssr15613 1 182282738 to 182282807 69 - TSS region transcription start site region 15613
Tssr10546 1 182287925 to 182287969 44 + TSS region transcription start site region 10546
Tssr10547 1 182287972 to 182287998 26 + TSS region transcription start site region 10547
Tssr10548 1 182288011 to 182288027 16 + TSS region transcription start site region 10548
Tssr10549 1 182288037 to 182288054 17 + TSS region transcription start site region 10549
Tssr10550 1 182288081 to 182288118 37 + TSS region transcription start site region 10550
1700047M11Rik 1 182300834 to 182303289 2455 + lincRNA gene RIKEN cDNA 1700047M11 gene
Tssr10551 1 182300943 to 182300989 46 + TSS region transcription start site region 10551
Fbxo28 1 182313102 to 182341606 28504 - protein coding gene F-box protein 28
Cpgi1145 1 182340861 to 182341869 1008 CpG island CpG island 1145
Tssr15614 1 182341585 to 182341625 40 - TSS region transcription start site region 15614
Tssr10552 1 182341726 to 182341735 9 + TSS region transcription start site region 10552
Gm5706 1 182392543 to 182393535 992 - pseudogene predicted gene 5706
Tssr15615 1 182403187 to 182403206 19 - TSS region transcription start site region 15615
Gm10517 1 182408264 to 182409021 757 - protein coding gene predicted gene 10517
Cpgi1146 1 182408485 to 182409678 1193 CpG island CpG island 1146
Tssr10553 1 182409162 to 182409184 22 + TSS region transcription start site region 10553
Trp53bp2 1 182409172 to 182462432 53260 + protein coding gene transformation related protein 53 binding protein 2
Tssr10554 1 182409247 to 182409259 12 + TSS region transcription start site region 10554
D1Mit360 1 182422914 to 182423027 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 360
Aec2 1 182423027 to 52418578 -130004449 QTL autoimmune exocrinopathy 2