Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:181223596-181366612

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38664 1 181211962 to 181236369 24407 + protein coding gene predicted gene, 38664
A430110L20Rik 1 181226082 to 181228498 2416 + lincRNA gene RIKEN cDNA A430110L20 gene
Tssr327 1 181232367 to 181232390 23 - TSS region transcription start site region 327
Tssr15580 1 181234419 to 181234459 40 - TSS region transcription start site region 15580
Rpl35a-ps2 1 181241988 to 181242320 332 - pseudogene ribosomal protein L35A, pseudogene 2
Tssr10519 1 181251269 to 181251282 13 + TSS region transcription start site region 10519
Tssr15581 1 181255305 to 181255310 5 - TSS region transcription start site region 15581
Cpgi1133 1 181256521 to 181256963 442 CpG island CpG island 1133
Tssr15582 1 181257139 to 181257163 24 - TSS region transcription start site region 15582
Tssr15583 1 181257661 to 181257674 13 - TSS region transcription start site region 15583
Cpgi1134 1 181272863 to 181273184 321 CpG island CpG island 1134
Tssr328 1 181282034 to 181282040 6 + TSS region transcription start site region 328
Gm8146 1 181282046 to 181283892 1846 + pseudogene predicted gene 8146
Tssr329 1 181285698 to 181285712 14 + TSS region transcription start site region 329
Tssr10520 1 181285795 to 181285828 33 + TSS region transcription start site region 10520
Gm39718 1 181287173 to 181288556 1383 + lncRNA gene predicted gene, 39718
Gm39717 1 181293596 to 181296612 3016 + lncRNA gene predicted gene, 39717
D1Mit542 1 181324127 to 181324251 124 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 542
Cpgi1135 1 181352077 to 181353789 1712 CpG island CpG island 1135
Tssr10521 1 181352469 to 181352491 22 + TSS region transcription start site region 10521
Tssr10522 1 181352618 to 181352641 23 + TSS region transcription start site region 10522
Cnih3 1 181352628 to 181460641 108013 + protein coding gene cornichon family AMPA receptor auxiliary protein 3
Tssr10523 1 181352649 to 181352664 15 + TSS region transcription start site region 10523
Tssr10524 1 181352681 to 181352693 12 + TSS region transcription start site region 10524