Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180944752-181064865

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem63a 1 180942344 to 180975112 32768 + protein coding gene transmembrane protein 63a
Tssr10508 1 180945898 to 180945925 27 + TSS region transcription start site region 10508
Tssr15559 1 180947583 to 180947584 1 - TSS region transcription start site region 15559
2210411M09Rik 1 180952064 to 180958149 6085 - antisense lncRNA gene RIKEN cDNA 2210411M09 gene
Tssr10509 1 180952677 to 180952685 8 + TSS region transcription start site region 10509
Gm36961 1 180976158 to 180976289 131 - pseudogene predicted gene, 36961
Ephx1 1 180989556 to 181017569 28013 - protein coding gene epoxide hydrolase 1, microsomal
Tssr15560 1 180989851 to 180989862 11 - TSS region transcription start site region 15560
Tssr15561 1 180994025 to 180994035 10 - TSS region transcription start site region 15561
Tssr15562 1 180996093 to 180996104 11 - TSS region transcription start site region 15562
Tssr15563 1 180996145 to 180996155 10 - TSS region transcription start site region 15563
Tssr15564 1 180999845 to 180999860 15 - TSS region transcription start site region 15564
Tssr15565 1 181001899 to 181001917 18 - TSS region transcription start site region 15565
Tssr15566 1 181001939 to 181001973 34 - TSS region transcription start site region 15566
D1Mit151 1 181004752 to 181004865 113 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 151
Aaj1 1 181004752 to 192168463 11163711 QTL anxiety in A/J 1
Axtq1 1 181004752 to 192168463 11163711 QTL anxiety QTL 1
Cpgi1129 1 181017196 to 181017546 350 CpG island CpG island 1129
Tssr15567 1 181017489 to 181017548 59 - TSS region transcription start site region 15567
Gm37431 1 181022663 to 181022773 110 - pseudogene predicted gene, 37431
Gm37086 1 181026278 to 181029729 3451 + unclassified gene predicted gene, 37086
Tssr10510 1 181035594 to 181035643 49 + TSS region transcription start site region 10510
Gm39716 1 181047133 to 181078853 31720 - lncRNA gene predicted gene, 39716
Tssr10511 1 181051232 to 181051242 10 + TSS region transcription start site region 10511
9130409I23Rik 1 181051237 to 181060667 9430 + protein coding gene RIKEN cDNA 9130409I23 gene
Tssr10512 1 181051249 to 181051266 17 + TSS region transcription start site region 10512
Gm17967 1 181052528 to 181053174 646 - pseudogene predicted gene, 17967
Tssr10513 1 181062058 to 181062075 17 + TSS region transcription start site region 10513
Gm37406 1 181062070 to 181064475 2405 + lincRNA gene predicted gene, 37406