Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180939556-181067569

37 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi1127	1	180941811 to 180943212	1401		CpG island	CpG island 1127
Tssr10503	1	180942325 to 180942352	27	+	TSS region	transcription start site region 10503
Tmem63a	1	180942344 to 180975112	32768	+	protein coding gene	transmembrane protein 63a
Tssr10504	1	180942359 to 180942368	9	+	TSS region	transcription start site region 10504
Tssr10505	1	180942434 to 180942445	11	+	TSS region	transcription start site region 10505
Tssr10506	1	180942452 to 180942477	25	+	TSS region	transcription start site region 10506
Tssr10507	1	180942500 to 180942529	29	+	TSS region	transcription start site region 10507
Cpgi1128	1	180943381 to 180943623	242		CpG island	CpG island 1128
Tssr324	1	180944057 to 180944071	14	+	TSS region	transcription start site region 324
Tssr10508	1	180945898 to 180945925	27	+	TSS region	transcription start site region 10508
Tssr15559	1	180947583 to 180947584	1	-	TSS region	transcription start site region 15559
2210411M09Rik	1	180952064 to 180958149	6085	-	antisense lncRNA gene	RIKEN cDNA 2210411M09 gene
Tssr10509	1	180952677 to 180952685	8	+	TSS region	transcription start site region 10509
Gm36961	1	180976158 to 180976289	131	-	pseudogene	predicted gene, 36961
Ephx1	1	180989556 to 181017569	28013	-	protein coding gene	epoxide hydrolase 1, microsomal
Tssr15560	1	180989851 to 180989862	11	-	TSS region	transcription start site region 15560
Tssr15561	1	180994025 to 180994035	10	-	TSS region	transcription start site region 15561
Tssr15562	1	180996093 to 180996104	11	-	TSS region	transcription start site region 15562
Tssr15563	1	180996145 to 180996155	10	-	TSS region	transcription start site region 15563
Tssr15564	1	180999845 to 180999860	15	-	TSS region	transcription start site region 15564
Tssr15565	1	181001899 to 181001917	18	-	TSS region	transcription start site region 15565
Tssr15566	1	181001939 to 181001973	34	-	TSS region	transcription start site region 15566
Aaj1	1	181004752 to 192168463	11163711		QTL	anxiety in A/J 1
D1Mit151	1	181004752 to 181004865	113		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 151
Axtq1	1	181004752 to 192168463	11163711		QTL	anxiety QTL 1
Cpgi1129	1	181017196 to 181017546	350		CpG island	CpG island 1129
Tssr15567	1	181017489 to 181017548	59	-	TSS region	transcription start site region 15567
Gm37431	1	181022663 to 181022773	110	-	pseudogene	predicted gene, 37431
Gm37086	1	181026278 to 181029729	3451	+	unclassified gene	predicted gene, 37086
Tssr10510	1	181035594 to 181035643	49	+	TSS region	transcription start site region 10510
Gm39716	1	181047133 to 181078853	31720	-	lncRNA gene	predicted gene, 39716
Tssr10511	1	181051232 to 181051242	10	+	TSS region	transcription start site region 10511
9130409I23Rik	1	181051237 to 181060667	9430	+	protein coding gene	RIKEN cDNA 9130409I23 gene
Tssr10512	1	181051249 to 181051266	17	+	TSS region	transcription start site region 10512
Gm17967	1	181052528 to 181053174	646	-	pseudogene	predicted gene, 17967
Tssr10513	1	181062058 to 181062075	17	+	TSS region	transcription start site region 10513
Gm37406	1	181062070 to 181064475	2405	+	lincRNA gene	predicted gene, 37406