Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180902677-181002685

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1125 1 180903853 to 180904880 1027 CpG island CpG island 1125
Tssr10500 1 180904278 to 180904343 65 + TSS region transcription start site region 10500
Pycr2 1 180904293 to 180908088 3795 + protein coding gene pyrroline-5-carboxylate reductase family, member 2
Tssr10501 1 180904740 to 180904783 43 + TSS region transcription start site region 10501
Tssr15558 1 180906893 to 180906900 7 - TSS region transcription start site region 15558
Gm32199 1 180912117 to 180914468 2351 + lncRNA gene predicted gene, 32199
Gm39715 1 180920413 to 180936671 16258 - lncRNA gene predicted gene, 39715
Tssr10502 1 180935037 to 180935041 4 + TSS region transcription start site region 10502
Lefty1 1 180935039 to 180938401 3362 + protein coding gene left right determination factor 1
Cpgi1126 1 180936722 to 180937364 642 CpG island CpG island 1126
Cpgi1127 1 180941811 to 180943212 1401 CpG island CpG island 1127
Tssr10503 1 180942325 to 180942352 27 + TSS region transcription start site region 10503
Tmem63a 1 180942344 to 180975112 32768 + protein coding gene transmembrane protein 63a
Tssr10504 1 180942359 to 180942368 9 + TSS region transcription start site region 10504
Tssr10505 1 180942434 to 180942445 11 + TSS region transcription start site region 10505
Tssr10506 1 180942452 to 180942477 25 + TSS region transcription start site region 10506
Tssr10507 1 180942500 to 180942529 29 + TSS region transcription start site region 10507
Cpgi1128 1 180943381 to 180943623 242 CpG island CpG island 1128
Tssr324 1 180944057 to 180944071 14 + TSS region transcription start site region 324
Tssr10508 1 180945898 to 180945925 27 + TSS region transcription start site region 10508
Tssr15559 1 180947583 to 180947584 1 - TSS region transcription start site region 15559
2210411M09Rik 1 180952064 to 180958149 6085 - antisense lncRNA gene RIKEN cDNA 2210411M09 gene
Tssr10509 1 180952677 to 180952685 8 + TSS region transcription start site region 10509
Gm36961 1 180976158 to 180976289 131 - pseudogene predicted gene, 36961
Ephx1 1 180989556 to 181017569 28013 - protein coding gene epoxide hydrolase 1, microsomal
Tssr15560 1 180989851 to 180989862 11 - TSS region transcription start site region 15560
Tssr15561 1 180994025 to 180994035 10 - TSS region transcription start site region 15561
Tssr15562 1 180996093 to 180996104 11 - TSS region transcription start site region 15562
Tssr15563 1 180996145 to 180996155 10 - TSS region transcription start site region 15563
Tssr15564 1 180999845 to 180999860 15 - TSS region transcription start site region 15564
Tssr15565 1 181001899 to 181001917 18 - TSS region transcription start site region 15565
Tssr15566 1 181001939 to 181001973 34 - TSS region transcription start site region 15566