Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180792560-180823605

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi1120	1	180794049 to 180794613	564		CpG island	CpG island 1120
D1Mit509	1	180796342 to 180796455	113		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 509
H3f3a	1	180802560 to 180813605	11045	-	protein coding gene	H3 histone, family 3A
Gm17275	1	180802568 to 180809483	6915	+	lincRNA gene	predicted gene, 17275
Tssr15545	1	180808241 to 180808246	5	-	TSS region	transcription start site region 15545
Tssr15546	1	180808673 to 180808676	3	-	TSS region	transcription start site region 15546
Tssr15547	1	180812328 to 180812332	4	-	TSS region	transcription start site region 15547
Cpgi1121	1	180812497 to 180814652	2155		CpG island	CpG island 1121
Tssr15548	1	180813549 to 180813583	34	-	TSS region	transcription start site region 15548
Tssr15549	1	180813591 to 180813605	14	-	TSS region	transcription start site region 15549
G370120E05Rik	1	180813672 to 180833655	19983	+	lncRNA gene	RIKEN cDNA G370120E05 gene
H3f3aos	1	180813776 to 180816859	3083	+	antisense lncRNA gene	H3 histone, family 3A, opposite strand
Tssr15550	1	180813865 to 180813882	17	-	TSS region	transcription start site region 15550