Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180580691-180700706

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14 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Parp1 1 180568975 to 180601254 32279 + protein coding gene poly (ADP-ribose) polymerase family, member 1
Tssr10477 1 180583808 to 180583823 15 + TSS region transcription start site region 10477
Mir6904 1 180587201 to 180587267 66 + miRNA gene microRNA 6904
Tssr10478 1 180587980 to 180588023 43 + TSS region transcription start site region 10478
Tssr10479 1 180598240 to 180598254 14 + TSS region transcription start site region 10479
Tssr10480 1 180598257 to 180598272 15 + TSS region transcription start site region 10480
Cpgi1114 1 180640546 to 180642100 1554 CpG island CpG island 1114
Tssr10481 1 180640691 to 180640706 15 + TSS region transcription start site region 10481
Lin9 1 180641150 to 180690687 49537 + protein coding gene lin-9 homolog (C. elegans)
Tssr10482 1 180641330 to 180641374 44 + TSS region transcription start site region 10482
Mixl1 1 180693043 to 180697034 3991 - protein coding gene Mix1 homeobox-like 1 (Xenopus laevis)
Tssr15542 1 180694082 to 180694083 1 - TSS region transcription start site region 15542
Cpgi1115 1 180696463 to 180697598 1135 CpG island CpG island 1115
Tssr15543 1 180697022 to 180697028 6 - TSS region transcription start site region 15543