MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:180487201-180687267

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm37267	1	180508778 to 180519727	10949	-	lincRNA gene	predicted gene, 37267
Gm31986	1	180531425 to 180568795	37370	-	lncRNA gene	predicted gene, 31986
Tssr10473	1	180541565 to 180541615	50	+	TSS region	transcription start site region 10473
Cpgi1113	1	180568685 to 180569502	817		CpG island	CpG island 1113
Tssr10474	1	180568913 to 180568960	47	+	TSS region	transcription start site region 10474
Tssr10475	1	180568964 to 180569010	46	+	TSS region	transcription start site region 10475
Parp1	1	180568975 to 180601254	32279	+	protein coding gene	poly (ADP-ribose) polymerase family, member 1
Tssr10476	1	180579290 to 180579310	20	+	TSS region	transcription start site region 10476
Tssr15541	1	180580610 to 180580629	19	-	TSS region	transcription start site region 15541
Tssr10477	1	180583808 to 180583823	15	+	TSS region	transcription start site region 10477
Mir6904	1	180587201 to 180587267	66	+	miRNA gene	microRNA 6904
Tssr10478	1	180587980 to 180588023	43	+	TSS region	transcription start site region 10478
Tssr10479	1	180598240 to 180598254	14	+	TSS region	transcription start site region 10479
Tssr10480	1	180598257 to 180598272	15	+	TSS region	transcription start site region 10480
Cpgi1114	1	180640546 to 180642100	1554		CpG island	CpG island 1114
Tssr10481	1	180640691 to 180640706	15	+	TSS region	transcription start site region 10481
Lin9	1	180641150 to 180690687	49537	+	protein coding gene	lin-9 homolog (C. elegans)
Tssr10482	1	180641330 to 180641374	44	+	TSS region	transcription start site region 10482