Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180382387-180533504

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Itpkb	1	180330485 to 180424802	94317	+	protein coding gene	inositol 1,4,5-trisphosphate 3-kinase B
Tssr10463	1	180382373 to 180382400	27	+	TSS region	transcription start site region 10463
Cpgi1108	1	180387467 to 180387805	338		CpG island	CpG island 1108
Tssr15537	1	180387476 to 180387490	14	-	TSS region	transcription start site region 15537
Tssr10464	1	180387742 to 180387772	30	+	TSS region	transcription start site region 10464
Tssr10465	1	180387999 to 180388004	5	+	TSS region	transcription start site region 10465
Tssr15538	1	180393032 to 180393072	40	-	TSS region	transcription start site region 15538
Tssr10466	1	180393344 to 180393348	4	+	TSS region	transcription start site region 10466
Gm39712	1	180397791 to 180405372	7581	-	lncRNA gene	predicted gene, 39712
Tssr10467	1	180402041 to 180402063	22	+	TSS region	transcription start site region 10467
Cpgi1109	1	180403660 to 180404018	358		CpG island	CpG island 1109
Tssr15539	1	180403743 to 180403748	5	-	TSS region	transcription start site region 15539
Tssr10468	1	180419484 to 180419497	13	+	TSS region	transcription start site region 10468
Tssr10469	1	180421032 to 180421042	10	+	TSS region	transcription start site region 10469
Tssr10470	1	180421046 to 180421063	17	+	TSS region	transcription start site region 10470
Cpgi1110	1	180421748 to 180421947	199		CpG island	CpG island 1110
Tssr10471	1	180423440 to 180423466	26	+	TSS region	transcription start site region 10471
Tssr10472	1	180432148 to 180432172	24	+	TSS region	transcription start site region 10472
Stum	1	180432387 to 180483504	51117	-	protein coding gene	mechanosensory transduction mediator
Gm37984	1	180473355 to 180477087	3732	-	unclassified gene	predicted gene, 37984
Cpgi1111	1	180482681 to 180483773	1092		CpG island	CpG island 1111
Tssr15540	1	180483410 to 180483485	75	-	TSS region	transcription start site region 15540
Cpgi1112	1	180483892 to 180484359	467		CpG island	CpG island 1112
Gm37267	1	180508778 to 180519727	10949	-	lincRNA gene	predicted gene, 37267
Gm31986	1	180531425 to 180568795	37370	-	lncRNA gene	predicted gene, 31986