Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:180234731-180354734

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psen2 1 180227004 to 180263438 36434 - protein coding gene presenilin 2
Tssr15529 1 180235709 to 180235715 6 - TSS region transcription start site region 15529
Tssr15530 1 180245900 to 180245911 11 - TSS region transcription start site region 15530
Tssr15531 1 180245927 to 180245955 28 - TSS region transcription start site region 15531
Cpgi1103 1 180250142 to 180250345 203 CpG island CpG island 1103
Cpgi1104 1 180255801 to 180256599 798 CpG island CpG island 1104
Tssr15532 1 180256238 to 180256258 20 - TSS region transcription start site region 15532
Tssr15533 1 180256294 to 180256305 11 - TSS region transcription start site region 15533
Tssr10439 1 180256390 to 180256435 45 + TSS region transcription start site region 10439
Gm31728 1 180256429 to 180274963 18534 + antisense lncRNA gene predicted gene, 31728
Tssr15534 1 180263465 to 180263497 32 - TSS region transcription start site region 15534
Cpgi1105 1 180289533 to 180289754 221 CpG island CpG island 1105
Tssr10440 1 180294731 to 180294734 3 + TSS region transcription start site region 10440
Gm39713 1 180303202 to 180309067 5865 - lncRNA gene predicted gene, 39713
Tssr320 1 180312863 to 180312879 16 - TSS region transcription start site region 320
Gm5069 1 180326969 to 180330549 3580 - pseudogene predicted pseudogene 5069
Tssr10441 1 180330470 to 180330493 23 + TSS region transcription start site region 10441
Itpkb 1 180330485 to 180424802 94317 + protein coding gene inositol 1,4,5-trisphosphate 3-kinase B
Tssr10442 1 180330495 to 180330536 41 + TSS region transcription start site region 10442
Cpgi1106 1 180330502 to 180332927 2425 CpG island CpG island 1106
Tssr10443 1 180331618 to 180331622 4 + TSS region transcription start site region 10443
Tssr10444 1 180333887 to 180333910 23 + TSS region transcription start site region 10444
Tssr10445 1 180333986 to 180334009 23 + TSS region transcription start site region 10445
Tssr15535 1 180334687 to 180334700 13 - TSS region transcription start site region 15535
Tssr10446 1 180334824 to 180334841 17 + TSS region transcription start site region 10446
Tssr10447 1 180342312 to 180342329 17 + TSS region transcription start site region 10447
Tssr10448 1 180345933 to 180345944 11 + TSS region transcription start site region 10448
Tssr10449 1 180345984 to 180346003 19 + TSS region transcription start site region 10449
Tssr10450 1 180346031 to 180346045 14 + TSS region transcription start site region 10450