Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Cplaq13 | 1 | 8568896 | QTL | circadian period of locomotor activity 13 | ||
Hpic2 | 1 | 5931843 | QTL | haloperidol induced catalepsy 2 | ||
Gm31668 | 1 | 12327 | - | lncRNA gene | predicted gene, 31668 | |
Gm37070 | 1 | 459 | - | pseudogene | predicted gene, 37070 | |
Cpgi1100 | 1 | 1604 | CpG island | CpG island 1100 | ||
Tssr10433 | 1 | 9 | + | TSS region | transcription start site region 10433 | |
Tssr10434 | 1 | 96 | + | TSS region | transcription start site region 10434 | |
Cdc42bpa | 1 | 205131 | + | protein coding gene | CDC42 binding protein kinase alpha | |
Tssr10435 | 1 | 5 | + | TSS region | transcription start site region 10435 | |
Tssr10436 | 1 | 4 | + | TSS region | transcription start site region 10436 | |
Gm38169 | 1 | 2538 | + | unclassified gene | predicted gene, 38169 | |
Tssr15516 | 1 | 2 | - | TSS region | transcription start site region 15516 | |
Tssr10437 | 1 | 24 | + | TSS region | transcription start site region 10437 | |
9330156P08Rik | 1 | 4150 | unclassified gene | RIKEN cDNA 9330156P08 gene | ||
Gm38331 | 1 | 2670 | - | lncRNA gene | predicted gene, 38331 | |
Coq8a | 1 | 30782 | - | protein coding gene | coenzyme Q8A | |
Tssr15517 | 1 | 22 | - | TSS region | transcription start site region 15517 | |
Tssr15518 | 1 | 17 | - | TSS region | transcription start site region 15518 | |
Tssr15519 | 1 | 13 | - | TSS region | transcription start site region 15519 | |
Cpgi1101 | 1 | 800 | CpG island | CpG island 1101 | ||
Tssr15520 | 1 | 5 | - | TSS region | transcription start site region 15520 | |
Tssr15521 | 1 | 24 | - | TSS region | transcription start site region 15521 | |
Tssr15522 | 1 | 24 | - | TSS region | transcription start site region 15522 | |
Tssr15523 | 1 | 30 | - | TSS region | transcription start site region 15523 | |
Tssr15524 | 1 | 19 | - | TSS region | transcription start site region 15524 | |
Tssr10438 | 1 | 17 | + | TSS region | transcription start site region 10438 | |
Gm37336 | 1 | 10098 | - | lincRNA gene | predicted gene, 37336 | |
Cpgi1102 | 1 | 274 | CpG island | CpG island 1102 | ||
Psen2 | 1 | 36434 | - | protein coding gene | presenilin 2 | |
Tssr15525 | 1 | 2 | - | TSS region | transcription start site region 15525 | |
Tssr15526 | 1 | 41 | - | TSS region | transcription start site region 15526 | |
Tssr15527 | 1 | 18 | - | TSS region | transcription start site region 15527 | |
Tssr15528 | 1 | 31 | - | TSS region | transcription start site region 15528 | |
Tssr15529 | 1 | 6 | - | TSS region | transcription start site region 15529 | |
Tssr15530 | 1 | 11 | - | TSS region | transcription start site region 15530 | |
Tssr15531 | 1 | 28 | - | TSS region | transcription start site region 15531 | |
Cpgi1103 | 1 | 203 | CpG island | CpG island 1103 | ||
Cpgi1104 | 1 | 798 | CpG island | CpG island 1104 | ||
Tssr15532 | 1 | 20 | - | TSS region | transcription start site region 15532 | |
Tssr15533 | 1 | 11 | - | TSS region | transcription start site region 15533 | |
Tssr10439 | 1 | 45 | + | TSS region | transcription start site region 10439 | |
Gm31728 | 1 | 18534 | + | antisense lncRNA gene | predicted gene, 31728 | |
Tssr15534 | 1 | 32 | - | TSS region | transcription start site region 15534 | |
Cpgi1105 | 1 | 221 | CpG island | CpG island 1105 | ||
Tssr10440 | 1 | 3 | + | TSS region | transcription start site region 10440 | |
Gm39713 | 1 | 5865 | - | lncRNA gene | predicted gene, 39713 | |
Tssr320 | 1 | 16 | - | TSS region | transcription start site region 320 | |
Gm5069 | 1 | 3580 | - | pseudogene | predicted pseudogene 5069 | |
Tssr10441 | 1 | 23 | + | TSS region | transcription start site region 10441 | |
Itpkb | 1 | 94317 | + | protein coding gene | inositol 1,4,5-trisphosphate 3-kinase B | |
Tssr10442 | 1 | 41 | + | TSS region | transcription start site region 10442 | |
Cpgi1106 | 1 | 2425 | CpG island | CpG island 1106 | ||
Tssr10443 | 1 | 4 | + | TSS region | transcription start site region 10443 | |
Tssr10444 | 1 | 23 | + | TSS region | transcription start site region 10444 | |
Tssr10445 | 1 | 23 | + | TSS region | transcription start site region 10445 | |
Tssr15535 | 1 | 13 | - | TSS region | transcription start site region 15535 | |
Tssr10446 | 1 | 17 | + | TSS region | transcription start site region 10446 | |
Tssr10447 | 1 | 17 | + | TSS region | transcription start site region 10447 | |
Tssr10448 | 1 | 11 | + | TSS region | transcription start site region 10448 | |
Tssr10449 | 1 | 19 | + | TSS region | transcription start site region 10449 | |
Tssr10450 | 1 | 14 | + | TSS region | transcription start site region 10450 | |
Tssr10451 | 1 | 5 | + | TSS region | transcription start site region 10451 | |
Tssr10452 | 1 | 5 | + | TSS region | transcription start site region 10452 | |
Gm37033 | 1 | 7349 | + | unclassified gene | predicted gene, 37033 | |
Tssr10453 | 1 | 13 | + | TSS region | transcription start site region 10453 | |
Tssr10454 | 1 | 8 | + | TSS region | transcription start site region 10454 | |
Cpgi1107 | 1 | 634 | CpG island | CpG island 1107 | ||
Tssr15536 | 1 | 39 | - | TSS region | transcription start site region 15536 | |
Tssr10455 | 1 | 43 | + | TSS region | transcription start site region 10455 | |
Tssr10456 | 1 | 4 | + | TSS region | transcription start site region 10456 | |
Tssr10457 | 1 | 12 | + | TSS region | transcription start site region 10457 | |
Tssr10458 | 1 | 22 | + | TSS region | transcription start site region 10458 | |
Gm37390 | 1 | 871 | + | unclassified gene | predicted gene, 37390 | |
Tssr10459 | 1 | 3 | + | TSS region | transcription start site region 10459 | |
Gm36933 | 1 | 3070 | + | unclassified gene | predicted gene, 36933 | |
Tssr10460 | 1 | 23 | + | TSS region | transcription start site region 10460 | |
Tssr10461 | 1 | 29 | + | TSS region | transcription start site region 10461 | |
Tssr10462 | 1 | 12 | + | TSS region | transcription start site region 10462 | |
Tssr10463 | 1 | 27 | + | TSS region | transcription start site region 10463 | |
Cpgi1108 | 1 | 338 | CpG island | CpG island 1108 | ||
Tssr15537 | 1 | 14 | - | TSS region | transcription start site region 15537 | |
Tssr10464 | 1 | 30 | + | TSS region | transcription start site region 10464 | |
Tssr10465 | 1 | 5 | + | TSS region | transcription start site region 10465 | |
Tssr15538 | 1 | 40 | - | TSS region | transcription start site region 15538 | |
Tssr10466 | 1 | 4 | + | TSS region | transcription start site region 10466 | |
Gm39712 | 1 | 7581 | - | lncRNA gene | predicted gene, 39712 | |
Tssr10467 | 1 | 22 | + | TSS region | transcription start site region 10467 | |
Cpgi1109 | 1 | 358 | CpG island | CpG island 1109 | ||
Tssr15539 | 1 | 5 | - | TSS region | transcription start site region 15539 | |
Tssr10468 | 1 | 13 | + | TSS region | transcription start site region 10468 | |
Tssr10469 | 1 | 10 | + | TSS region | transcription start site region 10469 | |
Tssr10470 | 1 | 17 | + | TSS region | transcription start site region 10470 | |
Cpgi1110 | 1 | 199 | CpG island | CpG island 1110 | ||
Tssr10471 | 1 | 26 | + | TSS region | transcription start site region 10471 | |
Tssr10472 | 1 | 24 | + | TSS region | transcription start site region 10472 | |
Stum | 1 | 51117 | - | protein coding gene | mechanosensory transduction mediator | |
Gm37984 | 1 | 3732 | - | unclassified gene | predicted gene, 37984 | |
Cpgi1111 | 1 | 1092 | CpG island | CpG island 1111 | ||
Tssr15540 | 1 | 75 | - | TSS region | transcription start site region 15540 | |
Cpgi1112 | 1 | 467 | CpG island | CpG island 1112 | ||
Gm37267 | 1 | 10949 | - | lincRNA gene | predicted gene, 37267 | |
Gm31986 | 1 | 37370 | - | lncRNA gene | predicted gene, 31986 | |
Tssr10473 | 1 | 50 | + | TSS region | transcription start site region 10473 | |
Cpgi1113 | 1 | 817 | CpG island | CpG island 1113 | ||
Tssr10474 | 1 | 47 | + | TSS region | transcription start site region 10474 | |
Tssr10475 | 1 | 46 | + | TSS region | transcription start site region 10475 | |
Parp1 | 1 | 32279 | + | protein coding gene | poly (ADP-ribose) polymerase family, member 1 | |
Tssr10476 | 1 | 20 | + | TSS region | transcription start site region 10476 | |
Tssr15541 | 1 | 19 | - | TSS region | transcription start site region 15541 | |
Tssr10477 | 1 | 15 | + | TSS region | transcription start site region 10477 | |
Mir6904 | 1 | 66 | + | miRNA gene | microRNA 6904 | |
Tssr10478 | 1 | 43 | + | TSS region | transcription start site region 10478 | |
Tssr10479 | 1 | 14 | + | TSS region | transcription start site region 10479 | |
Tssr10480 | 1 | 15 | + | TSS region | transcription start site region 10480 | |
Cpgi1114 | 1 | 1554 | CpG island | CpG island 1114 | ||
Tssr10481 | 1 | 15 | + | TSS region | transcription start site region 10481 | |
Lin9 | 1 | 49537 | + | protein coding gene | lin-9 homolog (C. elegans) | |
Tssr10482 | 1 | 44 | + | TSS region | transcription start site region 10482 | |
Mixl1 | 1 | 3991 | - | protein coding gene | Mix1 homeobox-like 1 (Xenopus laevis) | |
Tssr15542 | 1 | 1 | - | TSS region | transcription start site region 15542 | |
Cpgi1115 | 1 | 1135 | CpG island | CpG island 1115 | ||
Tssr15543 | 1 | 6 | - | TSS region | transcription start site region 15543 | |
Gm8101 | 1 | 477 | + | pseudogene | predicted gene 8101 | |
Cpgi1116 | 1 | 1162 | CpG island | CpG island 1116 | ||
Tssr10483 | 1 | 12 | + | TSS region | transcription start site region 10483 | |
Tssr10484 | 1 | 87 | + | TSS region | transcription start site region 10484 | |
Acbd3 | 1 | 28161 | + | protein coding gene | acyl-Coenzyme A binding domain containing 3 | |
Tssr10485 | 1 | 27 | + | TSS region | transcription start site region 10485 | |
Tssr10486 | 1 | 13 | + | TSS region | transcription start site region 10486 | |
Tssr10487 | 1 | 6 | + | TSS region | transcription start site region 10487 | |
Tssr10488 | 1 | 24 | + | TSS region | transcription start site region 10488 | |
Tssr15544 | 1 | 11 | - | TSS region | transcription start site region 15544 | |
Gm37768 | 1 | 12626 | - | antisense lncRNA gene | predicted gene, 37768 | |
Tssr10489 | 1 | 8 | + | TSS region | transcription start site region 10489 | |
Tssr10490 | 1 | 12 | + | TSS region | transcription start site region 10490 | |
Tssr10491 | 1 | 24 | + | TSS region | transcription start site region 10491 | |
5830405M20Rik | 1 | 3050 | unclassified non-coding RNA gene | RIKEN cDNA 5830405M20 gene | ||
Gm38293 | 1 | 5159 | - | lincRNA gene | predicted gene, 38293 | |
Cpgi1117 | 1 | 213 | CpG island | CpG island 1117 | ||
Cpgi1118 | 1 | 549 | CpG island | CpG island 1118 | ||
Cpgi1119 | 1 | 1153 | CpG island | CpG island 1119 | ||
2900024J01Rik | 1 | 14190 | + | lncRNA gene | RIKEN cDNA 2900024J01 gene | |
Cpgi1120 | 1 | 564 | CpG island | CpG island 1120 | ||
D1Mit509 | 1 | 113 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 509 | ||
H3f3a | 1 | 11045 | - | protein coding gene | H3 histone, family 3A | |
Gm17275 | 1 | 6915 | + | lincRNA gene | predicted gene, 17275 | |
Tssr15545 | 1 | 5 | - | TSS region | transcription start site region 15545 | |
Tssr15546 | 1 | 3 | - | TSS region | transcription start site region 15546 | |
Tssr15547 | 1 | 4 | - | TSS region | transcription start site region 15547 | |
Cpgi1121 | 1 | 2155 | CpG island | CpG island 1121 | ||
Tssr15548 | 1 | 34 | - | TSS region | transcription start site region 15548 | |
Tssr15549 | 1 | 14 | - | TSS region | transcription start site region 15549 | |
G370120E05Rik | 1 | 19983 | + | lncRNA gene | RIKEN cDNA G370120E05 gene | |
H3f3aos | 1 | 3083 | + | antisense lncRNA gene | H3 histone, family 3A, opposite strand | |
Tssr15550 | 1 | 17 | - | TSS region | transcription start site region 15550 | |
Tssr15551 | 1 | 10 | - | TSS region | transcription start site region 15551 | |
Cpgi1122 | 1 | 161 | CpG island | CpG island 1122 | ||
Gm24836 | 1 | 107 | + | snRNA gene | predicted gene, 24836 | |
Tssr10492 | 1 | 32 | + | TSS region | transcription start site region 10492 | |
Tssr15552 | 1 | 9 | - | TSS region | transcription start site region 15552 | |
Tssr321 | 1 | 11 | - | TSS region | transcription start site region 321 | |
Tssr322 | 1 | 16 | - | TSS region | transcription start site region 322 | |
Tssr15553 | 1 | 15 | - | TSS region | transcription start site region 15553 | |
Tssr10493 | 1 | 12 | + | TSS region | transcription start site region 10493 | |
Tssr10494 | 1 | 11 | + | TSS region | transcription start site region 10494 | |
Tssr323 | 1 | 10 | + | TSS region | transcription start site region 323 | |
Tssr10495 | 1 | 8 | + | TSS region | transcription start site region 10495 | |
Cpgi1123 | 1 | 1042 | CpG island | CpG island 1123 | ||
Tssr15554 | 1 | 4 | - | TSS region | transcription start site region 15554 | |
Tssr10496 | 1 | 23 | + | TSS region | transcription start site region 10496 | |
Tssr10497 | 1 | 17 | + | TSS region | transcription start site region 10497 | |
Tssr10498 | 1 | 41 | + | TSS region | transcription start site region 10498 | |
Sde2 | 1 | 16962 | + | protein coding gene | SDE2 telomere maintenance homolog (S. pombe) | |
Gm20305 | 1 | 176 | - | pseudogene | predicted gene, 20305 | |
Gm18036 | 1 | 448 | + | pseudogene | predicted gene, 18036 | |
Gm39714 | 1 | 10346 | - | lncRNA gene | predicted gene, 39714 | |
Tssr15555 | 1 | 30 | - | TSS region | transcription start site region 15555 | |
Tssr15556 | 1 | 50 | - | TSS region | transcription start site region 15556 | |
Tssr10499 | 1 | 1 | + | TSS region | transcription start site region 10499 | |
Lefty2 | 1 | 5995 | + | protein coding gene | left-right determination factor 2 | |
Cpgi1124 | 1 | 654 | CpG island | CpG island 1124 | ||
Tssr15557 | 1 | 23 | - | TSS region | transcription start site region 15557 | |
Cpgi1125 | 1 | 1027 | CpG island | CpG island 1125 | ||
Tssr10500 | 1 | 65 | + | TSS region | transcription start site region 10500 | |
Pycr2 | 1 | 3795 | + | protein coding gene | pyrroline-5-carboxylate reductase family, member 2 | |
Tssr10501 | 1 | 43 | + | TSS region | transcription start site region 10501 | |
Tssr15558 | 1 | 7 | - | TSS region | transcription start site region 15558 | |
Gm32199 | 1 | 2351 | + | lncRNA gene | predicted gene, 32199 | |
Gm39715 | 1 | 16258 | - | lncRNA gene | predicted gene, 39715 | |
Tssr10502 | 1 | 4 | + | TSS region | transcription start site region 10502 | |
Lefty1 | 1 | 3362 | + | protein coding gene | left right determination factor 1 | |
Cpgi1126 | 1 | 642 | CpG island | CpG island 1126 | ||
Cpgi1127 | 1 | 1401 | CpG island | CpG island 1127 | ||
Tssr10503 | 1 | 27 | + | TSS region | transcription start site region 10503 | |
Tmem63a | 1 | 32768 | + | protein coding gene | transmembrane protein 63a | |
Tssr10504 | 1 | 9 | + | TSS region | transcription start site region 10504 | |
Tssr10505 | 1 | 11 | + | TSS region | transcription start site region 10505 | |
Tssr10506 | 1 | 25 | + | TSS region | transcription start site region 10506 | |
Tssr10507 | 1 | 29 | + | TSS region | transcription start site region 10507 | |
Cpgi1128 | 1 | 242 | CpG island | CpG island 1128 |