Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:179827449-180227451

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr10431 1 179846054 to 179846062 8 + TSS region transcription start site region 10431
Gm31668 1 179866087 to 179878414 12327 - lncRNA gene predicted gene, 31668
Tssr10432 1 179866671 to 179866674 3 + TSS region transcription start site region 10432
Gm37070 1 179924952 to 179925411 459 - pseudogene predicted gene, 37070
Cpgi1100 1 179959126 to 179960730 1604 CpG island CpG island 1100
Tssr10433 1 179959972 to 179959981 9 + TSS region transcription start site region 10433
Tssr10434 1 179959984 to 179960080 96 + TSS region transcription start site region 10434
Cdc42bpa 1 179960472 to 180165603 205131 + protein coding gene CDC42 binding protein kinase alpha
Tssr10435 1 179960774 to 179960779 5 + TSS region transcription start site region 10435
Tssr10436 1 179975935 to 179975939 4 + TSS region transcription start site region 10436
Gm38169 1 180021062 to 180023600 2538 + unclassified gene predicted gene, 38169
Tssr15516 1 180027449 to 180027451 2 - TSS region transcription start site region 15516
Tssr10437 1 180072458 to 180072482 24 + TSS region transcription start site region 10437
9330156P08Rik 1 180125338 to 180129488 4150 unclassified gene RIKEN cDNA 9330156P08 gene
Gm38331 1 180145481 to 180148151 2670 - lncRNA gene predicted gene, 38331
Coq8a 1 180165238 to 180196020 30782 - protein coding gene coenzyme Q8A
Tssr15517 1 180193158 to 180193180 22 - TSS region transcription start site region 15517
Tssr15518 1 180193475 to 180193492 17 - TSS region transcription start site region 15518
Tssr15519 1 180193653 to 180193666 13 - TSS region transcription start site region 15519
Cpgi1101 1 180195486 to 180196286 800 CpG island CpG island 1101
Tssr15520 1 180195941 to 180195946 5 - TSS region transcription start site region 15520
Tssr15521 1 180195953 to 180195977 24 - TSS region transcription start site region 15521
Tssr15522 1 180195981 to 180196005 24 - TSS region transcription start site region 15522
Tssr15523 1 180199556 to 180199586 30 - TSS region transcription start site region 15523
Tssr15524 1 180199587 to 180199606 19 - TSS region transcription start site region 15524
Tssr10438 1 180199799 to 180199816 17 + TSS region transcription start site region 10438
Gm37336 1 180202303 to 180212401 10098 - lincRNA gene predicted gene, 37336
Cpgi1102 1 180225995 to 180226269 274 CpG island CpG island 1102
Psen2 1 180227004 to 180263438 36434 - protein coding gene presenilin 2