Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:178789449-179559478

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif26b 1 178529125 to 178939200 410075 + protein coding gene kinesin family member 26B
Tssr10412 1 178798396 to 178798427 31 + TSS region transcription start site region 10412
Tssr10413 1 178798448 to 178798467 19 + TSS region transcription start site region 10413
Tssr10414 1 178821040 to 178821041 1 + TSS region transcription start site region 10414
Tssr10415 1 178828106 to 178828110 4 + TSS region transcription start site region 10415
Tssr319 1 178871442 to 178871443 1 + TSS region transcription start site region 319
Gm16564 1 178898582 to 178917614 19032 - antisense lncRNA gene predicted gene 16564
Cpgi1094 1 178917298 to 178918101 803 CpG island CpG island 1094
A730054J21Rik 1 178935043 to 178939199 4156 unclassified gene RIKEN cDNA A730054J21 gene
D1Mit315 1 178940049 to 178940193 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 315
Smyd3 1 178955031 to 179518053 563022 - protein coding gene SET and MYND domain containing 3
Tssr15495 1 178989350 to 178989360 10 - TSS region transcription start site region 15495
Tssr15496 1 179139419 to 179139423 4 - TSS region transcription start site region 15496
Tssr15497 1 179156264 to 179156307 43 - TSS region transcription start site region 15497
Tssr10416 1 179174449 to 179174478 29 + TSS region transcription start site region 10416
A130004G11Rik 1 179237130 to 179240753 3623 unclassified gene RIKEN cDNA A130004G11 gene
Gm46250 1 179307543 to 179320650 13107 - lncRNA gene predicted gene, 46250
Gm31349 1 179324935 to 179328064 3129 - lncRNA gene predicted gene, 31349
Tssr15498 1 179381703 to 179381717 14 - TSS region transcription start site region 15498
D1Ertd704e 1 179400846 to 179401089 243 DNA segment DNA segment, Chr 1, ERATO Doi 704, expressed
Tssr15499 1 179403882 to 179403886 4 - TSS region transcription start site region 15499
Tssr15500 1 179502114 to 179502118 4 - TSS region transcription start site region 15500
Cpgi1095 1 179517215 to 179518143 928 CpG island CpG island 1095
Tssr15501 1 179517976 to 179517989 13 - TSS region transcription start site region 15501
Tssr15502 1 179517992 to 179518026 34 - TSS region transcription start site region 15502
Tssr15503 1 179518028 to 179518045 17 - TSS region transcription start site region 15503
Gm5561 1 179520378 to 179520857 479 - pseudogene predicted gene 5561
Tfb2m 1 179528055 to 179546267 18212 - protein coding gene transcription factor B2, mitochondrial
Gm15480 1 179538417 to 179538935 518 + pseudogene predicted gene 15480
Cpgi1096 1 179545680 to 179547007 1327 CpG island CpG island 1096
Tssr15504 1 179546227 to 179546260 33 - TSS region transcription start site region 15504
Tssr15505 1 179546261 to 179546276 15 - TSS region transcription start site region 15505
Tssr10417 1 179546303 to 179546363 60 + TSS region transcription start site region 10417
Cnst 1 179546370 to 179627478 81108 + protein coding gene consortin, connexin sorting protein
Tssr10418 1 179546383 to 179546405 22 + TSS region transcription start site region 10418
Tssr10419 1 179546408 to 179546433 25 + TSS region transcription start site region 10419
Tssr10420 1 179546434 to 179546520 86 + TSS region transcription start site region 10420
Tssr10421 1 179546521 to 179546538 17 + TSS region transcription start site region 10421
Tssr10422 1 179549655 to 179549677 22 + TSS region transcription start site region 10422