Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:178619350-179359360

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kif26b 1 178529125 to 178939200 410075 + protein coding gene kinesin family member 26B
Tssr10409 1 178636896 to 178636904 8 + TSS region transcription start site region 10409
Gm24405 1 178636905 to 178637071 166 + snRNA gene predicted gene, 24405
D1Mit405 1 178662154 to 178662273 119 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 405
Tssr10410 1 178739990 to 178739991 1 + TSS region transcription start site region 10410
Gm34176 1 178755808 to 178756281 473 + pseudogene predicted gene, 34176
Tssr10411 1 178766993 to 178766999 6 + TSS region transcription start site region 10411
Gm46249 1 178775960 to 178784669 8709 + lncRNA gene predicted gene, 46249
Tssr10412 1 178798396 to 178798427 31 + TSS region transcription start site region 10412
Tssr10413 1 178798448 to 178798467 19 + TSS region transcription start site region 10413
Tssr10414 1 178821040 to 178821041 1 + TSS region transcription start site region 10414
Tssr10415 1 178828106 to 178828110 4 + TSS region transcription start site region 10415
Tssr319 1 178871442 to 178871443 1 + TSS region transcription start site region 319
Gm16564 1 178898582 to 178917614 19032 - antisense lncRNA gene predicted gene 16564
Cpgi1094 1 178917298 to 178918101 803 CpG island CpG island 1094
A730054J21Rik 1 178935043 to 178939199 4156 unclassified gene RIKEN cDNA A730054J21 gene
D1Mit315 1 178940049 to 178940193 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 315
Smyd3 1 178955031 to 179518053 563022 - protein coding gene SET and MYND domain containing 3
Tssr15495 1 178989350 to 178989360 10 - TSS region transcription start site region 15495
Tssr15496 1 179139419 to 179139423 4 - TSS region transcription start site region 15496
Tssr15497 1 179156264 to 179156307 43 - TSS region transcription start site region 15497
Tssr10416 1 179174449 to 179174478 29 + TSS region transcription start site region 10416
A130004G11Rik 1 179237130 to 179240753 3623 unclassified gene RIKEN cDNA A130004G11 gene
Gm46250 1 179307543 to 179320650 13107 - lncRNA gene predicted gene, 46250
Gm31349 1 179324935 to 179328064 3129 - lncRNA gene predicted gene, 31349