MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:178455697-178655716

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Efcab2	1	178405881 to 178483250	77369	+	protein coding gene	EF-hand calcium binding domain 2
Gm31289	1	178504096 to 178513939	9843	+	lncRNA gene	predicted gene, 31289
Gm39709	1	178514232 to 178518038	3806	+	lncRNA gene	predicted gene, 39709
Tssr10401	1	178525719 to 178525735	16	+	TSS region	transcription start site region 10401
Cpgi1093	1	178527283 to 178531028	3745		CpG island	CpG island 1093
Tssr10402	1	178528593 to 178528631	38	+	TSS region	transcription start site region 10402
Tssr10403	1	178528853 to 178528867	14	+	TSS region	transcription start site region 10403
Tssr10404	1	178529113 to 178529134	21	+	TSS region	transcription start site region 10404
Kif26b	1	178529125 to 178939200	410075	+	protein coding gene	kinesin family member 26B
Tssr10405	1	178555697 to 178555716	19	+	TSS region	transcription start site region 10405
Tssr10406	1	178555870 to 178555881	11	+	TSS region	transcription start site region 10406
Tssr10407	1	178555886 to 178555899	13	+	TSS region	transcription start site region 10407
Tssr10408	1	178566477 to 178566481	4	+	TSS region	transcription start site region 10408
4930527L19Rik	1	178588650 to 178588883	233		unclassified gene	RIKEN cDNA 4930527L19 gene
Tssr15494	1	178590358 to 178590373	15	-	TSS region	transcription start site region 15494
Gm39710	1	178608246 to 178617000	8754	-	lncRNA gene	predicted gene, 39710
Tssr10409	1	178636896 to 178636904	8	+	TSS region	transcription start site region 10409
Gm24405	1	178636905 to 178637071	166	+	snRNA gene	predicted gene, 24405