Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:178355881-178533250

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm27458	1	178363401 to 178363521	120	-	miRNA gene	predicted gene, 27458
Cpgi1091	1	178368589 to 178369279	690		CpG island	CpG island 1091
Bw8q1	1	178373696 to 178373830	134		QTL	body weight at 8 weeks QTL 1
D1Mit116	1	178373696 to 178373830	134		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 116
Gm24919	1	178390819 to 178390924	105	+	snRNA gene	predicted gene, 24919
Cpgi1092	1	178405627 to 178406670	1043		CpG island	CpG island 1092
Efcab2	1	178405881 to 178483250	77369	+	protein coding gene	EF-hand calcium binding domain 2
Tssr10392	1	178406017 to 178406020	3	+	TSS region	transcription start site region 10392
Tssr10393	1	178406031 to 178406034	3	+	TSS region	transcription start site region 10393
Tssr10394	1	178406038 to 178406045	7	+	TSS region	transcription start site region 10394
Tssr10395	1	178406052 to 178406070	18	+	TSS region	transcription start site region 10395
Tssr10396	1	178406072 to 178406105	33	+	TSS region	transcription start site region 10396
Tssr15493	1	178406415 to 178406439	24	-	TSS region	transcription start site region 15493
Tssr10397	1	178406495 to 178406560	65	+	TSS region	transcription start site region 10397
Tssr10398	1	178448606 to 178448615	9	+	TSS region	transcription start site region 10398
Tssr10399	1	178448626 to 178448648	22	+	TSS region	transcription start site region 10399
Tssr10400	1	178448658 to 178448701	43	+	TSS region	transcription start site region 10400
Gm31289	1	178504096 to 178513939	9843	+	lncRNA gene	predicted gene, 31289
Gm39709	1	178514232 to 178518038	3806	+	lncRNA gene	predicted gene, 39709
Tssr10401	1	178525719 to 178525735	16	+	TSS region	transcription start site region 10401
Cpgi1093	1	178527283 to 178531028	3745		CpG island	CpG island 1093
Tssr10402	1	178528593 to 178528631	38	+	TSS region	transcription start site region 10402
Tssr10403	1	178528853 to 178528867	14	+	TSS region	transcription start site region 10403
Tssr10404	1	178529113 to 178529134	21	+	TSS region	transcription start site region 10404
Kif26b	1	178529125 to 178939200	410075	+	protein coding gene	kinesin family member 26B