Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:176764660-177070437

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cep170	1	176733653 to 176814067	80414	-	protein coding gene	centrosomal protein 170
Mir350	1	176772325 to 176772423	98	-	miRNA gene	microRNA 350
Tssr10331	1	176779225 to 176779227	2	+	TSS region	transcription start site region 10331
Gm25288	1	176793956 to 176794220	264	+	unclassified non-coding RNA gene	predicted gene, 25288
Tssr15420	1	176797315 to 176797320	5	-	TSS region	transcription start site region 15420
Tssr15421	1	176808968 to 176808991	23	-	TSS region	transcription start site region 15421
Cpgi1074	1	176813231 to 176815084	1853		CpG island	CpG island 1074
Tssr15422	1	176813920 to 176813931	11	-	TSS region	transcription start site region 15422
Tssr15423	1	176813943 to 176813960	17	-	TSS region	transcription start site region 15423
Tssr15424	1	176814014 to 176814025	11	-	TSS region	transcription start site region 15424
Tssr15425	1	176814041 to 176814064	23	-	TSS region	transcription start site region 15425
Tssr15426	1	176814070 to 176814133	63	-	TSS region	transcription start site region 15426
Tssr15427	1	176814166 to 176814189	23	-	TSS region	transcription start site region 15427
Sdccag8	1	176814660 to 177020437	205777	+	protein coding gene	serologically defined colon cancer antigen 8
Tssr10332	1	176814852 to 176814910	58	+	TSS region	transcription start site region 10332
Tssr10333	1	176814911 to 176814922	11	+	TSS region	transcription start site region 10333
Hmga2-ps1	1	176834624 to 176836133	1509	-	pseudogene	high mobility group AT-hook 2, pseudogene 1
Cpgi1075	1	176835418 to 176835862	444		CpG island	CpG island 1075
Tssr10334	1	176835519 to 176835532	13	+	TSS region	transcription start site region 10334
Gm38158	1	176835724 to 176836062	338	+	pseudogene	predicted gene, 38158
Tssr15428	1	176835938 to 176835951	13	-	TSS region	transcription start site region 15428
Tssr15429	1	176836135 to 176836176	41	-	TSS region	transcription start site region 15429
Tssr310	1	176837532 to 176837538	6	+	TSS region	transcription start site region 310
Gm38053	1	176854400 to 176854559	159	-	pseudogene	predicted gene, 38053
Tssr10335	1	176874399 to 176874410	11	+	TSS region	transcription start site region 10335
Gm25993	1	176879834 to 176879913	79	+	miRNA gene	predicted gene, 25993
Gm37246	1	176881571 to 176882405	834	+	pseudogene	predicted gene, 37246
Gm37490	1	176889507 to 176890230	723	+	unclassified gene	predicted gene, 37490
Tssr10336	1	176902891 to 176902895	4	+	TSS region	transcription start site region 10336
Gm15423	1	176927999 to 176932711	4712	-	antisense lncRNA gene	predicted gene 15423
Gm37519	1	176974236 to 176976445	2209	+	unclassified gene	predicted gene, 37519
Cpgi1076	1	176993752 to 176993960	208		CpG island	CpG island 1076
Tssr10337	1	176996952 to 176996969	17	+	TSS region	transcription start site region 10337
Tssr10338	1	176997827 to 176997869	42	+	TSS region	transcription start site region 10338
Cpgi1077	1	176997930 to 176998315	385		CpG island	CpG island 1077
Akt3	1	177020073 to 177258203	238130	-	protein coding gene	thymoma viral proto-oncogene 3
Tssr15430	1	177033706 to 177033709	3	-	TSS region	transcription start site region 15430
Gm37960	1	177035040 to 177036936	1896	-	unclassified gene	predicted gene, 37960
Gm37106	1	177045242 to 177046773	1531	-	unclassified gene	predicted gene, 37106
Tssr15431	1	177050199 to 177050213	14	-	TSS region	transcription start site region 15431
Tssr15432	1	177064484 to 177064505	21	-	TSS region	transcription start site region 15432