Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:176373800-176813954

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scgq1 1 156774467 to 176435127 19660660 QTL spontaneous crescentic glomerulonephritis QTL 1
Gm36536 1 176430111 to 176527269 97158 - lincRNA gene predicted gene, 36536
D1Mit166 1 176435007 to 176435127 120 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 166
Pcho1 1 176435007 to 176435127 120 QTL plasma cholesterol 1
D1Dcr18 1 176435008 to 176435131 123 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 18
D1Jpk1 1 176593800 to 176593954 154 DNA segment DNA segment, Chr 1, Japan, Kominami 1
Gm36586 1 176597509 to 176614764 17255 - lncRNA gene predicted gene, 36586
Tssr15412 1 176614761 to 176614770 9 - TSS region transcription start site region 15412
Gm17966 1 176642021 to 176642558 537 - pseudogene predicted gene, 17966
Gm26104 1 176700617 to 176700724 107 + snRNA gene predicted gene, 26104
Cpgi1073 1 176725004 to 176725289 285 CpG island CpG island 1073
Cep170 1 176733653 to 176814067 80414 - protein coding gene centrosomal protein 170
Tssr15413 1 176734209 to 176734213 4 - TSS region transcription start site region 15413
Tssr15414 1 176735012 to 176735029 17 - TSS region transcription start site region 15414
3110062G12Rik 1 176745564 to 176746982 1418 - unclassified gene RIKEN cDNA 3110062G12 gene
Gm38104 1 176751521 to 176753415 1894 - unclassified gene predicted gene, 38104
Tssr15415 1 176754377 to 176754407 30 - TSS region transcription start site region 15415
Tssr15416 1 176754412 to 176754423 11 - TSS region transcription start site region 15416
Gm36992 1 176754517 to 176758876 4359 + antisense lncRNA gene predicted gene, 36992
Tssr10330 1 176754520 to 176754531 11 + TSS region transcription start site region 10330
Tssr15417 1 176756315 to 176756337 22 - TSS region transcription start site region 15417
Tssr15418 1 176756715 to 176756726 11 - TSS region transcription start site region 15418
Tssr15419 1 176756898 to 176756901 3 - TSS region transcription start site region 15419
Mir350 1 176772325 to 176772423 98 - miRNA gene microRNA 350
Tssr10331 1 176779225 to 176779227 2 + TSS region transcription start site region 10331
Gm25288 1 176793956 to 176794220 264 + unclassified non-coding RNA gene predicted gene, 25288
Tssr15420 1 176797315 to 176797320 5 - TSS region transcription start site region 15420
Tssr15421 1 176808968 to 176808991 23 - TSS region transcription start site region 15421
Cpgi1074 1 176813231 to 176815084 1853 CpG island CpG island 1074
Tssr15422 1 176813920 to 176813931 11 - TSS region transcription start site region 15422
Tssr15423 1 176813943 to 176813960 17 - TSS region transcription start site region 15423