Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:175525580-175725613

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eila1 1 112081092 to 175641372 63560280 QTL ethanol induced locomotor activity 1
Ctex 1 153681660 to 175641372 21959712 QTL Ctla4 expression QTL
D1Mit357 1 175530703 to 175530826 123 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 357
Gm36307 1 175574309 to 175578425 4116 + lincRNA gene predicted gene, 36307
Fh1 1 175601378 to 175625635 24257 - protein coding gene fumarate hydratase 1
Tssr15395 1 175607983 to 175607993 10 - TSS region transcription start site region 15395
Tssr15396 1 175615840 to 175615856 16 - TSS region transcription start site region 15396
Cpgi1068 1 175624979 to 175625877 898 CpG island CpG island 1068
Tssr15397 1 175625552 to 175625576 24 - TSS region transcription start site region 15397
Tssr15398 1 175625580 to 175625613 33 - TSS region transcription start site region 15398
Tssr15399 1 175625618 to 175625628 10 - TSS region transcription start site region 15399
Tssr10313 1 175631968 to 175631978 10 + TSS region transcription start site region 10313
Tssr10314 1 175631996 to 175632001 5 + TSS region transcription start site region 10314
Tssr10315 1 175632015 to 175632024 9 + TSS region transcription start site region 10315
Tssr10316 1 175632044 to 175632057 13 + TSS region transcription start site region 10316
Tssr10317 1 175632064 to 175632094 30 + TSS region transcription start site region 10317
Tssr10318 1 175632096 to 175632101 5 + TSS region transcription start site region 10318
Tssr10319 1 175632104 to 175632111 7 + TSS region transcription start site region 10319
Tssr10320 1 175632120 to 175632133 13 + TSS region transcription start site region 10320
Tssr10321 1 175632141 to 175632151 10 + TSS region transcription start site region 10321
Tssr10322 1 175632155 to 175632160 5 + TSS region transcription start site region 10322
Tssr10323 1 175632169 to 175632185 16 + TSS region transcription start site region 10323
Kmo 1 175632193 to 175660853 28660 + protein coding gene kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
Tssr10324 1 175637879 to 175637895 16 + TSS region transcription start site region 10324
Yaa4 1 175641251 to 175641372 121 QTL Y-linked autoimmune acceleration QTL 4
Sle9 1 175641251 to 175641372 121 QTL systematic lupus erythematosus susceptibility 9
Lmr20b 1 175641251 to 175641372 121 QTL leishmaniasis resistance 20b
Lmr20c 1 175641251 to 175641372 121 QTL leishmaniasis resistance 20c
Sluc37 1 175641251 to 194429220 18787969 QTL susceptibility to lung cancer 37
Lmr20 1 175641251 to 175641372 121 QTL leishmaniasis resistance 20
Lmr20a 1 175641251 to 175641372 121 QTL leishmaniasis resistance 20a
Hpic2 1 175641251 to 181573094 5931843 QTL haloperidol induced catalepsy 2
D1Mit403 1 175641251 to 175641372 121 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 403
Opn3 1 175662421 to 175692776 30355 - protein coding gene opsin 3
Chml 1 175682237 to 175688353 6116 - protein coding gene choroideremia-like
Cpgi1069 1 175691914 to 175693122 1208 CpG island CpG island 1069
Tssr15400 1 175692590 to 175692615 25 - TSS region transcription start site region 15400
Tssr15401 1 175692624 to 175692663 39 - TSS region transcription start site region 15401
Gm39707 1 175693046 to 175696660 3614 + lncRNA gene predicted gene, 39707
D1Mit271 1 175698343 to 175698473 130 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 271
Tssr10325 1 175698552 to 175698560 8 + TSS region transcription start site region 10325
Tssr10326 1 175698586 to 175698600 14 + TSS region transcription start site region 10326
Wdr64 1 175698593 to 175815734 117141 + protein coding gene WD repeat domain 64